RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ACTR3P61158 418 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 PTPRCAPQ14761 206 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 TRIM67Q6ZTA4 783 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 CCNYL1Q8N7R7 359 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 SHKBP1Q8TBC3 707 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 BRSK1Q8TDC3 778 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 MYRFLQ96LU7 910 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 PSKH2Q96QS6 385 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 CCDC28BQ9BUN5 200 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 NUF2Q9BZD4 464 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 SHCBP1LQ9BZQ2 653 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 NACA2Q9H009 215 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 SUDS3Q9H7L9 328 aaPredicted RBP15.82■□□□□ 0.12
MBD1-227ENST00000592060 STX18Q9P2W9 335 aaKnown RBP15.82■□□□□ 0.12
MBD1-227ENST00000592060 HSFX1Q9UBD0 423 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 STOML1Q9UBI4 398 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 UBA2Q9UBT2 640 aaPredicted RBP15.82■□□□□ 0.12
MBD1-227ENST00000592060 LTBP2Q14767 1821 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 GBF1Q92538 1859 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 CCDC162PA2VCL2 907 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 A8MT66 165 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 NEMP1O14524 444 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 CLDN11O75508 207 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 CR2P20023 1033 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 FDXRP22570 491 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 SLC26A3P40879 764 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 OXCT1P55809 520 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 SEMA3AQ14563 771 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 RALGPS1Q5JS13 557 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 IL31Q6EBC2 164 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 FAM45BPQ6NSW5 357 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 ZNF549Q6P9A3 640 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 FRMD7Q6ZUT3 714 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 CHST9Q7L1S5 443 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 DEFB128Q7Z7B8 93 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 MYLK4Q86YV6 388 aaPredicted RBP15.81■□□□□ 0.12
MBD1-227ENST00000592060 BBS5Q8N3I7 341 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 CPSF7Q8N684 471 aaKnown RBP15.81■□□□□ 0.12
MBD1-227ENST00000592060 OR13C4Q8NGS5 318 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 FAM45AQ8TCE6 357 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 ACTRT2Q8TDY3 377 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 SCG3Q8WXD2 468 aaKnown RBP15.81■□□□□ 0.12
MBD1-227ENST00000592060 STMN2Q93045 179 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 WBP2Q969T9 261 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 PPP1R12CQ9BZL4 782 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 NCKIPSDQ9NZQ3 722 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 MTF2Q9Y483 593 aaPredicted RBP15.81■□□□□ 0.12
MBD1-227ENST00000592060 OBSL1O75147 1896 aa15.81■□□□□ 0.12
MBD1-227ENST00000592060 ILVBLA1L0T0 632 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 CCNT2O60583 730 aaKnown RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 TBX10O75333 385 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 UPP2O95045 317 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 PARNO95453 639 aaKnown RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 RBP1P09455 135 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 EPHA3P29320 983 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 TIAL1Q01085 375 aaKnown RBP eCLIP15.8■□□□□ 0.12
MBD1-227ENST00000592060 SLC34A1Q06495 639 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 ILF2Q12905 390 aaKnown RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 ACAP2Q15057 778 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 CMPK2Q5EBM0 449 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 KLC3Q6P597 504 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 PGM2L1Q6PCE3 622 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 ACAD11Q709F0 780 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 ANKRD33Q7Z3H0 272 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 SH3RF2Q8TEC5 729 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 NRG4Q8WWG1 115 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 CCDC126Q96EE4 140 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 RSRC1Q96IZ7 334 aaKnown RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 CINPQ9BW66 212 aaPredicted RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 KLF16Q9BXK1 252 aaPredicted RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 OGDHLQ9ULD0 1010 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 CORO1CQ9ULV4 474 aaPredicted RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 CDYLQ9Y232 598 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 YIPF1Q9Y548 306 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 SLC22A2O15244 555 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 CD3EAPO15446 510 aaKnown RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 BUD23O43709 281 aaKnown RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 RHOCP08134 193 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 PIRTP0C851 137 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 OGNP20774 298 aaKnown RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 PIK3R1P27986 724 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 SUOXP51687 545 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 ZNF140P52738 457 aaPredicted RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 DSG1Q02413 1049 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 PEX6Q13608 980 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 RFTN1Q14699 578 aaPredicted RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 TAF11Q15544 211 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 PIM3Q86V86 326 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 RNF135Q8IUD6 432 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 ZNF461Q8TAF7 563 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 TRMT2BQ96GJ1 504 aaKnown RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 MAELQ96JY0 434 aaKnown RBP15.8■□□□□ 0.12
MBD1-227ENST00000592060 PPP1R36Q96LQ0 422 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 DEFB118Q96PH6 123 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 RTKNQ9BST9 563 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 SPON2Q9BUD6 331 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 GKN1Q9NS71 199 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 TRPM5Q9NZQ8 1165 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 TRIM17Q9Y577 477 aa15.8■□□□□ 0.12
MBD1-227ENST00000592060 SPO11Q9Y5K1 396 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms