RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CEP192Q8TEP8 1941 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 hCG_1818297A0A087WSY0 165 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 SPAARA0A1B0GVQ0 90 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 GRID2IPA4D2P6 1211 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 CFAP69A5D8W1 941 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 GOLGA6CA6NDK9 693 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 GOLGA6BA6NDN3 693 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 GOLGA6L9A6NEM1 432 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 POM121BA6NF01 834 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 MIF4GDA9UHW6 222 aaKnown RBP10.12□□□□□ -0.79
BRCA1-227ENST00000591849 C10orf142B7Z368 130 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 H3BM21 787 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 TRAFD1O14545 582 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-227ENST00000591849 MTSS1O43312 755 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 HTRA2O43464 458 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-227ENST00000591849 PCDHGA12O60330 932 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 PGLSO95336 258 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 FTCDO95954 541 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 PCCBP05166 539 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 HLA-DQB2P05538 268 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 GOLGA6DP0CG33 693 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 CTPS1P17812 591 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 CR2P20023 1033 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 HTR1BP28222 390 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 VIPR1P32241 457 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 CTNNA1P35221 906 aaKnown RBP10.12□□□□□ -0.79
BRCA1-227ENST00000591849 MMP12P39900 470 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 CD86P42081 329 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 MARCKSL1P49006 195 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 YPEL5P62699 121 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 IFI35P80217 286 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-227ENST00000591849 TRAF2Q12933 501 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 BNIP3Q12983 259 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 PPP2R5EQ16537 467 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 CCDC157Q569K6 752 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 KYAT3Q6YP21 454 aaKnown RBP10.12□□□□□ -0.79
BRCA1-227ENST00000591849 GCNT7Q6ZNI0 430 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 DPPA4Q7L190 304 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 ABI3BPQ7Z7G0 1075 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 ZC3H18Q86VM9 953 aaKnown RBP10.12□□□□□ -0.79
BRCA1-227ENST00000591849 ZSWIM9Q86XI8 627 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 RNF10Q8N5U6 811 aaKnown RBP10.12□□□□□ -0.79
BRCA1-227ENST00000591849 EID2Q8N6I1 236 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 ATL2Q8NHH9 583 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 ECHDC3Q96DC8 303 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 BMFQ96LC9 184 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 CEP41Q9BYV8 373 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 DNAJC28Q9NX36 388 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 GOLGA6AQ9NYA3 693 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 KLHL8Q9P2G9 620 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-227ENST00000591849 SAE1Q9UBE0 346 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-227ENST00000591849 B4GALT6Q9UBX8 382 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 TRIM10Q9UDY6 481 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 FTSJ1Q9UET6 329 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 APOBEC2Q9Y235 224 aaKnown RBP10.12□□□□□ -0.79
BRCA1-227ENST00000591849 CHKBQ9Y259 395 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 ADGRG1Q9Y653 693 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 TNRC6BQ9UPQ9 1833 aaKnown RBP10.12□□□□□ -0.79
BRCA1-227ENST00000591849 CHD6Q8TD26 2715 aa10.12□□□□□ -0.79
BRCA1-227ENST00000591849 NEMP2A6NFY4 417 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 HACD1B0YJ81 288 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 TOR1BO14657 336 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 SPINT1O43278 529 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 SDC3O75056 442 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 RECQL5O94762 991 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-227ENST00000591849 STK10O94804 968 aaKnown RBP10.11□□□□□ -0.79
BRCA1-227ENST00000591849 TJP3O95049 919 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 LDOC1O95751 146 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-227ENST00000591849 CCDC175P0C221 793 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 ALPPL2P10696 532 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 EPHA8P29322 1005 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-227ENST00000591849 RXRGP48443 463 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 HNRNPKP61978 463 aaKnown RBP eCLIP10.11□□□□□ -0.79
BRCA1-227ENST00000591849 FOXC1Q12948 553 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 IRF4Q15306 451 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 WSCD2Q2TBF2 565 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 ZNF542PQ5EBM4 170 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 FAXCQ5TGI0 409 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 LIPIQ6XZB0 460 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 BBS12Q6ZW61 710 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 PID1Q7Z2X4 250 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 KDELC2Q7Z4H8 507 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 NT5DC3Q86UY8 548 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 LRRC8AQ8IWT6 810 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 LPCAT1Q8NF37 534 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 VOPP1Q96AW1 172 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 CENPTQ96BT3 561 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 IFT43Q96FT9 208 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 SCRN2Q96FV2 425 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 KLF6Q99612 283 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-227ENST00000591849 IL12RB2Q99665 862 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 ADGRE3Q9BY15 652 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 OSBPL8Q9BZF1 889 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 PCDH9Q9HC56 1237 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 MBNL1Q9NR56 388 aaKnown RBP10.11□□□□□ -0.79
BRCA1-227ENST00000591849 KCTD5Q9NXV2 234 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 PCOLCE2Q9UKZ9 415 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 DNPEPQ9ULA0 475 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 KNL1Q8NG31 2342 aa10.11□□□□□ -0.79
BRCA1-227ENST00000591849 SPTY2D1-AS1A0A0U1RR47 76 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms