RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 PNMA8BQ9ULN7 279 aaPredicted RBP22.46■■□□□ 1.19
MBD3-208ENST00000590830 SHROOM3Q8TF72 1996 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 HYAL3O43820 417 aaPredicted RBP22.45■■□□□ 1.18
MBD3-208ENST00000590830 LZTS3O60299 673 aaPredicted RBP22.45■■□□□ 1.18
MBD3-208ENST00000590830 FZD6O60353 706 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 DKK1O94907 266 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 CPP00450 1065 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 GIMD1P0DJR0 217 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 DGKAP23743 735 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 VAV2P52735 878 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 ZBTB17Q13105 803 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 EIF2B5Q13144 721 aaKnown RBP22.45■■□□□ 1.18
MBD3-208ENST00000590830 PDE1CQ14123 709 aaPredicted RBP22.45■■□□□ 1.18
MBD3-208ENST00000590830 LRRC14Q15048 493 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 DAAM2Q86T65 1068 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 CBARPQ8N350 705 aaPredicted RBP22.45■■□□□ 1.18
MBD3-208ENST00000590830 CHCHD4Q8N4Q1 142 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 PAF1Q8N7H5 531 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 IFT43Q96FT9 208 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 C1QTNF7Q9BXJ2 289 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 AMACRQ9UHK6 382 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 PHTF1Q9UMS5 762 aa22.45■■□□□ 1.18
MBD3-208ENST00000590830 A0A1W2PQ67 120 aa22.44■■□□□ 1.18
MBD3-208ENST00000590830 GOLGA8CPA6NN73 597 aa22.44■■□□□ 1.18
MBD3-208ENST00000590830 TRIM38O00635 465 aa22.44■■□□□ 1.18
MBD3-208ENST00000590830 TNFSF14O43557 240 aa22.44■■□□□ 1.18
MBD3-208ENST00000590830 PIAS2O75928 621 aa22.44■■□□□ 1.18
MBD3-208ENST00000590830 RECQL5O94762 991 aaPredicted RBP22.44■■□□□ 1.18
MBD3-208ENST00000590830 ZFXP17010 805 aaPredicted RBP22.44■■□□□ 1.18
MBD3-208ENST00000590830 IFI35P80217 286 aaPredicted RBP22.44■■□□□ 1.18
MBD3-208ENST00000590830 ODF2Q5BJF6 829 aa22.44■■□□□ 1.18
MBD3-208ENST00000590830 RAB44Q7Z6P3 723 aaPredicted RBP22.44■■□□□ 1.18
MBD3-208ENST00000590830 RCOR2Q8IZ40 523 aa22.44■■□□□ 1.18
MBD3-208ENST00000590830 PLA2G15Q8NCC3 412 aa22.44■■□□□ 1.18
MBD3-208ENST00000590830 DESI2Q9BSY9 194 aa22.44■■□□□ 1.18
MBD3-208ENST00000590830 DNAJC28Q9NX36 388 aa22.44■■□□□ 1.18
MBD3-208ENST00000590830 PPIL1Q9Y3C6 166 aa22.44■■□□□ 1.18
MBD3-208ENST00000590830 ANKRD36A6QL64 1941 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 A0A0U1RQS6 177 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 CST8O60676 142 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 ZRANB2O95218 330 aaKnown RBP eCLIP22.43■■□□□ 1.18
MBD3-208ENST00000590830 IPO7O95373 1038 aaKnown RBP22.43■■□□□ 1.18
MBD3-208ENST00000590830 PRLP01236 227 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 CSF2P04141 144 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 MMP2P08253 660 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 PECAM1P16284 738 aaPredicted RBP22.43■■□□□ 1.18
MBD3-208ENST00000590830 CTPS1P17812 591 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 LHCGRP22888 699 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 YPEL5P62699 121 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 AP1B1Q10567 949 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 INPP5AQ14642 412 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 PDK1Q15118 436 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 INAVAQ3KP66 663 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 ARMC12Q5T9G4 340 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 KAZNQ674X7 775 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 NYAP1Q6ZVC0 841 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 ADAMTS14Q8WXS8 1223 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 SCRN2Q96FV2 425 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 COQ10AQ96MF6 247 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 ZNF830Q96NB3 372 aaPredicted RBP22.43■■□□□ 1.18
MBD3-208ENST00000590830 ANP32EQ9BTT0 268 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 SCNM1Q9BWG6 230 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 CEP41Q9BYV8 373 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 TRIM10Q9UDY6 481 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 FTSJ1Q9UET6 329 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 TTLL3Q9Y4R7 772 aa22.43■■□□□ 1.18
MBD3-208ENST00000590830 hCG_1818297A0A087WSY0 165 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 GRID2IPA4D2P6 1211 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 LDOC1O95751 146 aaPredicted RBP22.42■■□□□ 1.18
MBD3-208ENST00000590830 ELFN1P0C7U0 828 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 CES1P23141 567 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 VIPR1P32241 457 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 TFDP2Q14188 446 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 CNGA3Q16281 694 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 TSPAN33Q86UF1 283 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 PARGQ86W56 976 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 PELI3Q8N2H9 469 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 LRRC57Q8N9N7 239 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 EXD1Q8NHP7 514 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 CNDP2Q96KP4 475 aaKnown RBP22.42■■□□□ 1.18
MBD3-208ENST00000590830 MCCC1Q96RQ3 725 aaPredicted RBP22.42■■□□□ 1.18
MBD3-208ENST00000590830 HERPUD2Q9BSE4 406 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 TCEAL2Q9H3H9 227 aaPredicted RBP22.42■■□□□ 1.18
MBD3-208ENST00000590830 APOBEC2Q9Y235 224 aaKnown RBP22.42■■□□□ 1.18
MBD3-208ENST00000590830 CHKBQ9Y259 395 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 PCDHA3Q9Y5H8 950 aa22.42■■□□□ 1.18
MBD3-208ENST00000590830 LRRK1Q38SD2 2015 aa22.41■■□□□ 1.18
MBD3-208ENST00000590830 ARID1BQ8NFD5 2236 aaPredicted RBP22.41■■□□□ 1.18
MBD3-208ENST00000590830 NPIPB15A6NHN6 443 aaPredicted RBP22.41■■□□□ 1.18
MBD3-208ENST00000590830 HEXIM1O94992 359 aaKnown RBP22.41■■□□□ 1.18
MBD3-208ENST00000590830 TRIM16O95361 564 aa22.41■■□□□ 1.18
MBD3-208ENST00000590830 PCCBP05166 539 aa22.41■■□□□ 1.18
MBD3-208ENST00000590830 ALPIP09923 528 aa22.41■■□□□ 1.18
MBD3-208ENST00000590830 NME1P15531 152 aaKnown RBP22.41■■□□□ 1.18
MBD3-208ENST00000590830 CTNNA1P35221 906 aaKnown RBP22.41■■□□□ 1.18
MBD3-208ENST00000590830 HNF1BP35680 557 aa22.41■■□□□ 1.18
MBD3-208ENST00000590830 PEX5P50542 639 aa22.41■■□□□ 1.18
MBD3-208ENST00000590830 NAP1L1P55209 391 aaKnown RBP22.41■■□□□ 1.18
MBD3-208ENST00000590830 DNAJC3Q13217 504 aa22.41■■□□□ 1.18
MBD3-208ENST00000590830 TFDP3Q5H9I0 405 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms