RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 LRRC49Q8IUZ0 686 aa15.26■□□□□ 0.03
CIRBP-228ENST00000590347 SPARTQ8N0X7 666 aa15.26■□□□□ 0.03
CIRBP-228ENST00000590347 LSMEM2Q8N112 164 aa15.26■□□□□ 0.03
CIRBP-228ENST00000590347 SFRP1Q8N474 314 aa15.26■□□□□ 0.03
CIRBP-228ENST00000590347 PCDH19Q8TAB3 1148 aa15.26■□□□□ 0.03
CIRBP-228ENST00000590347 NRBF2Q96F24 287 aa15.26■□□□□ 0.03
CIRBP-228ENST00000590347 DEPDC7Q96QD5 511 aa15.26■□□□□ 0.03
CIRBP-228ENST00000590347 MYOZ2Q9NPC6 264 aa15.26■□□□□ 0.03
CIRBP-228ENST00000590347 PAQR5Q9NXK6 330 aaPredicted RBP15.26■□□□□ 0.03
CIRBP-228ENST00000590347 PIM2Q9P1W9 311 aa15.26■□□□□ 0.03
CIRBP-228ENST00000590347 VPS28Q9UK41 221 aa15.26■□□□□ 0.03
CIRBP-228ENST00000590347 TMX2Q9Y320 296 aa15.26■□□□□ 0.03
CIRBP-228ENST00000590347 GOLGA8CPA6NN73 597 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 NFIBO00712 420 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 NME4O00746 187 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 KMOO15229 486 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 DEAF1O75398 565 aaPredicted RBP15.25■□□□□ 0.03
CIRBP-228ENST00000590347 ALBP02768 609 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 TPH1P17752 444 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 HMGB2P26583 209 aaKnown RBP15.25■□□□□ 0.03
CIRBP-228ENST00000590347 TNFSF9P41273 254 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 LEPRP48357 1165 aaKnown RBP15.25■□□□□ 0.03
CIRBP-228ENST00000590347 NUMBP49757 651 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 P2RX3P56373 397 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 PLIN5Q00G26 463 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 CLEC6AQ6EIG7 209 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 TRNP1Q6NT89 227 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 TIFABQ6ZNK6 161 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 SLC7A3Q8WY07 619 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 HDAC2Q92769 488 aaKnown RBP15.25■□□□□ 0.03
CIRBP-228ENST00000590347 OMA1Q96E52 524 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 FBXL18Q96ME1 805 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 RAVER2Q9HCJ3 691 aaKnown RBP15.25■□□□□ 0.03
CIRBP-228ENST00000590347 ENPP5Q9UJA9 477 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 INVSQ9Y283 1065 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 ERVH48-1M5A8F1 160 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 KPNA6O60684 536 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 CAPN1P07384 714 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 MADCAM1Q13477 382 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 VPS26BQ4G0F5 336 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 PXDC1Q5TGL8 231 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 WDR78Q5VTH9 848 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 STEAP3Q658P3 488 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 RETREG3Q86VR2 466 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 DNAJB14Q8TBM8 379 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 CEP170P1Q96L14 293 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 RNF157Q96PX1 679 aa15.25■□□□□ 0.03
CIRBP-228ENST00000590347 TARS2Q9BW92 718 aaKnown RBP15.25■□□□□ 0.03
CIRBP-228ENST00000590347 WDR12Q9GZL7 423 aaKnown RBP15.25■□□□□ 0.03
CIRBP-228ENST00000590347 C6orf62Q9GZU0 229 aaPredicted RBP15.25■□□□□ 0.03
CIRBP-228ENST00000590347 KPNA7A9QM74 516 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 H0YJX3 145 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 SDHDO14521 159 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 HTR1AP08908 422 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 ALOX12P18054 663 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 IL10P22301 178 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 CD68P34810 354 aaPredicted RBP15.24■□□□□ 0.03
CIRBP-228ENST00000590347 CAP2P40123 477 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 BCAT1P54687 386 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 C1QTNF8P60827 252 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 NIPAL4Q0D2K0 466 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 RAP1GAP2Q684P5 730 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 FKBP9P1Q75LS8 142 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 TAS1R3Q7RTX0 852 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 SLC22A17Q8WUG5 538 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 SLC10A4Q96EP9 437 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 MFSD3Q96ES6 412 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 RHNO1Q9BSD3 238 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 REXO4Q9GZR2 422 aaKnown RBP15.24■□□□□ 0.03
CIRBP-228ENST00000590347 TBC1D13Q9NVG8 400 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 KCND2Q9NZV8 630 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 TMEM9Q9P0T7 183 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 RUVBL2Q9Y230 463 aaKnown RBP15.24■□□□□ 0.03
CIRBP-228ENST00000590347 RAD54BQ9Y620 910 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 H3BUI4 141 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 SLC4A1P02730 911 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 TCF3P15923 654 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 CLCNKBP51801 687 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 FKBP1AP62942 108 aaKnown RBP15.24■□□□□ 0.03
CIRBP-228ENST00000590347 GPLD1P80108 840 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 GRSF1Q12849 480 aaKnown RBP eCLIP15.24■□□□□ 0.032e-8■■□□□ 12.5
CIRBP-228ENST00000590347 CNSTQ6PJW8 725 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 C15orf39Q6ZRI6 1047 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 CLEC4FQ8N1N0 589 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 FKBP10Q96AY3 582 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 ZNF717Q9BY31 904 aaPredicted RBP15.24■□□□□ 0.03
CIRBP-228ENST00000590347 LRRC40Q9H9A6 602 aa15.24■□□□□ 0.03
CIRBP-228ENST00000590347 APOL1O14791 398 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 DYRK3O43781 588 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 PRPSAP2O60256 369 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 PEX10O60683 326 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 PDGFRAP16234 1089 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 PSMA4P25789 261 aaKnown RBP15.23■□□□□ 0.03
CIRBP-228ENST00000590347 RABL3Q5HYI8 236 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 BTBD8Q5XKL5 378 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 MFSD2AQ8NA29 543 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 URGCPQ8TCY9 931 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 TMEM143Q96AN5 459 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 ADPGKQ9BRR6 497 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 C9orf16Q9BUW7 83 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms