RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 SYNDIG1Q9H7V2 258 aa12.74□□□□□ -0.37
RFX1-207ENST00000589937 FGF22Q9HCT0 170 aa12.74□□□□□ -0.37
RFX1-207ENST00000589937 MRPL40Q9NQ50 206 aaKnown RBP12.74□□□□□ -0.37
RFX1-207ENST00000589937 IFNKQ9P0W0 207 aa12.74□□□□□ -0.37
RFX1-207ENST00000589937 SPASTQ9UBP0 616 aa12.74□□□□□ -0.37
RFX1-207ENST00000589937 B4GALT6Q9UBX8 382 aa12.74□□□□□ -0.37
RFX1-207ENST00000589937 PCDHGC4Q9Y5F7 938 aa12.74□□□□□ -0.37
RFX1-207ENST00000589937 CSNK1G3Q9Y6M4 447 aa12.74□□□□□ -0.37
RFX1-207ENST00000589937 KALRNO60229 2985 aa12.74□□□□□ -0.37
RFX1-207ENST00000589937 A0A1W2PQJ5 194 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 TMEM202A6NGA9 273 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 EIF3CLB5ME19 914 aaKnown RBP12.73□□□□□ -0.37
RFX1-207ENST00000589937 MAFKO60675 156 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 RECQL5O94762 991 aaPredicted RBP12.73□□□□□ -0.37
RFX1-207ENST00000589937 GP1BAP07359 652 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 ELFN1P0C7U0 828 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 PCK1P35558 622 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 CSNK1DP48730 415 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 HK3P52790 923 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 UBASH3AP57075 661 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 YPEL5P62699 121 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 BCL2L1Q07817 233 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 PTK2BQ14289 1009 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 ZNF235Q14590 738 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 TBC1D25Q3MII6 688 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 ATP13A4Q4VNC1 1196 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 C3orf38Q5JPI3 329 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 TMCO3Q6UWJ1 677 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 LIPIQ6XZB0 460 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 DPPA4Q7L190 304 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 PSTKQ8IV42 348 aaKnown RBP12.73□□□□□ -0.37
RFX1-207ENST00000589937 PAF1Q8N7H5 531 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 SNIP1Q8TAD8 396 aaKnown RBP12.73□□□□□ -0.37
RFX1-207ENST00000589937 PDCD6IPQ8WUM4 868 aaKnown RBP12.73□□□□□ -0.37
RFX1-207ENST00000589937 PTCD2Q8WV60 388 aaKnown RBP12.73□□□□□ -0.37
RFX1-207ENST00000589937 ATXN7L3BQ96GX2 97 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 DEPDC7Q96QD5 511 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 PSKH2Q96QS6 385 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 EIF3CQ99613 913 aaKnown RBP12.73□□□□□ -0.37
RFX1-207ENST00000589937 LGR4Q9BXB1 951 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 PACSIN1Q9BY11 444 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 EDEM3Q9BZQ6 932 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 SUDS3Q9H7L9 328 aaPredicted RBP12.73□□□□□ -0.37
RFX1-207ENST00000589937 NOD2Q9HC29 1040 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 MRPL47Q9HD33 250 aaKnown RBP12.73□□□□□ -0.37
RFX1-207ENST00000589937 KLQ9UEF7 1012 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 SEPT3Q9UH03 358 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 NENFQ9UMX5 172 aa12.73□□□□□ -0.37
RFX1-207ENST00000589937 EME2A4GXA9 379 aaPredicted RBP12.72□□□□□ -0.37
RFX1-207ENST00000589937 SERPING1P05155 500 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 CYP1A2P05177 515 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 ANXA6P08133 673 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 CR2P20023 1033 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 LHCGRP22888 699 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 ARL4AP40617 200 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 HCAR3P49019 387 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 SUOXP51687 545 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 SRP54P61011 504 aaKnown RBP12.72□□□□□ -0.37
RFX1-207ENST00000589937 AP1S1P61966 158 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 ZBED6P86452 979 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 MTM1Q13496 603 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 IHHQ14623 411 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 GRM3Q14832 879 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 NFKBIBQ15653 356 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 CNGA3Q16281 694 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 ISXQ2M1V0 245 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 DENND2CQ68D51 928 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 RFLNAQ6ZTI6 216 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 B3GNT8Q7Z7M8 397 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 TSPAN33Q86UF1 283 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 ATPAF2Q8N5M1 289 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.72□□□□□ -0.37
RFX1-207ENST00000589937 NIPA2Q8N8Q9 360 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 CCL4L1Q8NHW4 92 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 BTN2A2Q8WVV5 523 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 CCDC74AQ96AQ1 378 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 WDR92Q96MX6 357 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 CCDC3Q9BQI4 270 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 ABCG4Q9H172 646 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 USP29Q9HBJ7 922 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 GULP1Q9UBP9 304 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 SALL4Q9UJQ4 1053 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 CAPN11Q9UMQ6 739 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 SATB2Q9UPW6 733 aa12.72□□□□□ -0.37
RFX1-207ENST00000589937 GCN1Q92616 2671 aaKnown RBP12.71□□□□□ -0.37
RFX1-207ENST00000589937 NPIPB15A6NHN6 443 aaPredicted RBP12.71□□□□□ -0.37
RFX1-207ENST00000589937 AGRPO00253 132 aa12.71□□□□□ -0.37
RFX1-207ENST00000589937 TPP1O14773 563 aa12.71□□□□□ -0.37
RFX1-207ENST00000589937 RASGRP1O95267 797 aa12.71□□□□□ -0.37
RFX1-207ENST00000589937 CPP00450 1065 aa12.71□□□□□ -0.37
RFX1-207ENST00000589937 PRB1P04280 392 aa12.71□□□□□ -0.37
RFX1-207ENST00000589937 CTPS1P17812 591 aa12.71□□□□□ -0.37
RFX1-207ENST00000589937 IL4RP24394 825 aa12.71□□□□□ -0.37
RFX1-207ENST00000589937 CASP14P31944 242 aa12.71□□□□□ -0.37
RFX1-207ENST00000589937 SSR1P43307 286 aaKnown RBP12.71□□□□□ -0.37
RFX1-207ENST00000589937 DUSP3P51452 185 aaPredicted RBP12.71□□□□□ -0.37
RFX1-207ENST00000589937 CDH6P55285 790 aa12.71□□□□□ -0.37
RFX1-207ENST00000589937 TAS2R40P59535 323 aa12.71□□□□□ -0.37
RFX1-207ENST00000589937 RFTN1Q14699 578 aaPredicted RBP12.71□□□□□ -0.37
RFX1-207ENST00000589937 ACOX1Q15067 660 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms