RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	SPTY2D1-AS1	A0A0U1RR47	76 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	CFAP69	A5D8W1	941 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867		A8MX80	341 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	CST8	O60676	142 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	MAGEC1	O60732	1142 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	DKK1	O94907	266 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	ZRANB2	O95218	330 aa	Known RBP eCLIP	17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	ZFX	P17010	805 aa	Predicted RBP	17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	XPA	P23025	273 aa	Predicted RBP	17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	CTNNA2	P26232	953 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	SIM1	P81133	766 aa	Predicted RBP	17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	EIF2B5	Q13144	721 aa	Known RBP	17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	PDK1	Q15118	436 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	PRKD1	Q15139	912 aa	Predicted RBP	17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	TRIP6	Q15654	476 aa	Known RBP	17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	CNGA3	Q16281	694 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	TFDP3	Q5H9I0	405 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	KAZN	Q674X7	775 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	AADACL2	Q6P093	401 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	SLCO6A1	Q86UG4	719 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	NT5DC3	Q86UY8	548 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	RCOR2	Q8IZ40	523 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	BBS5	Q8N3I7	341 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	SLC25A45	Q8N413	288 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	SETD7	Q8WTS6	366 aa	Known RBP	17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	MCCC1	Q96RQ3	725 aa	Predicted RBP	17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	MAK16	Q9BXY0	300 aa	Known RBP	17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	CEP41	Q9BYV8	373 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	POLR1E	Q9GZS1	481 aa	Known RBP	17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	UCKL1	Q9NWZ5	548 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	ADGRG1	Q9Y653	693 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	LRP4	O75096	1905 aa		17.39	■□□□□ 0.37
MBD1-221	ENST00000589867	ASPM	Q8IZT6	3477 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	NPIPB15	A6NHN6	443 aa	Predicted RBP	17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	FPGT	O14772	594 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	SDC3	O75056	442 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	IPO7	O95373	1038 aa	Known RBP	17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	CP	P00450	1065 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	RABIF	P47224	123 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	SKOR1	P84550	965 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	PPP2R5E	Q16537	467 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	ZNF542P	Q5EBM4	170 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	CFAP58	Q5T655	872 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	ERAP2	Q6P179	960 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	KIAA1328	Q86T90	577 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	TSPAN33	Q86UF1	283 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	OXR1	Q8N573	874 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	PLA2G15	Q8NCC3	412 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	FAM174A	Q8TBP5	190 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	RHBDD1	Q8TEB9	315 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	PDCD6IP	Q8WUM4	868 aa	Known RBP	17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	TADA1	Q96BN2	335 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	COQ10A	Q96MF6	247 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	PHTF1	Q9UMS5	762 aa		17.38	■□□□□ 0.37
MBD1-221	ENST00000589867	KNTC1	P50748	2209 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	MACROD2	A1Z1Q3	448 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	RECQL5	O94762	991 aa	Predicted RBP	17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	HEXIM1	O94992	359 aa	Known RBP	17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	ALPI	P09923	528 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	ATXN1L	P0C7T5	689 aa	Known RBP	17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	TGM2	P21980	687 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	GRK6	P43250	576 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	POLR2L	P62875	67 aa	Known RBP	17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	ITK	Q08881	620 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	AP1B1	Q10567	949 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	WASHC5	Q12768	1159 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	SUZ12	Q15022	739 aa	Known RBP	17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	ARMC12	Q5T9G4	340 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	KCTD16	Q68DU8	428 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	RFLNA	Q6ZTI6	216 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	BBS12	Q6ZW61	710 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	KIAA1524	Q8TCG1	905 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	IFT43	Q96FT9	208 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	SCRN2	Q96FV2	425 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	CALR3	Q96L12	384 aa	Known RBP	17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	HEMGN	Q9BXL5	484 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	TDRD1	Q9BXT4	1180 aa	Known RBP	17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	CHKB	Q9Y259	395 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	CAPN6	Q9Y6Q1	641 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	PTPRB	P23467	1997 aa		17.37	■□□□□ 0.37
MBD1-221	ENST00000589867	MAP1B	P46821	2468 aa	Known RBP	17.36	■□□□□ 0.37
MBD1-221	ENST00000589867		A0A1W2PQ67	120 aa		17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	TRIM38	O00635	465 aa		17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	YKT6	O15498	198 aa		17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	DDX3Y	O15523	660 aa	Known RBP	17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	PIAS2	O75928	621 aa		17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	PYGM	P11217	842 aa		17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	NME1	P15531	152 aa	Known RBP	17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	CTPS1	P17812	591 aa		17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	DGKA	P23743	735 aa		17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	PTPN3	P26045	913 aa		17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	VIPR1	P32241	457 aa		17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	CD68	P34810	354 aa	Predicted RBP	17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	NR2C2	P49116	596 aa		17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	ARRB1	P49407	418 aa	Predicted RBP	17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	GSDMD	P57764	484 aa		17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	PDE1C	Q14123	709 aa	Predicted RBP	17.36	■□□□□ 0.37
MBD1-221	ENST00000589867	TFDP2	Q14188	446 aa		17.36	■□□□□ 0.37

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