RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 LZTR1Q8N653 840 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 NIPA2Q8N8Q9 360 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 KCTD6Q8NC69 237 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 TRIM58Q8NG06 486 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 LRRN4Q8WUT4 740 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 TEKT4Q8WW24 435 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 CENPTQ96BT3 561 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 ZNF641Q96N77 438 aaPredicted RBP11.64□□□□□ -0.55
RFX1-204ENST00000588885 ATP13A3Q9H7F0 1226 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 SEPT3Q9UH03 358 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 KLF15Q9UIH9 416 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 PCDHGC4Q9Y5F7 938 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 CELSR3Q9NYQ7 3312 aa11.64□□□□□ -0.55
RFX1-204ENST00000588885 KIF2AO00139 706 aaPredicted RBP11.63□□□□□ -0.55
RFX1-204ENST00000588885 RIOK3O14730 519 aaKnown RBP11.63□□□□□ -0.55
RFX1-204ENST00000588885 SCAMP1O15126 338 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 LZTS3O60299 673 aaPredicted RBP11.63□□□□□ -0.55
RFX1-204ENST00000588885 RFPL3O75679 317 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 PIAS2O75928 621 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 PROSCO94903 275 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 MAP3K6O95382 1288 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 ATP1A1P05023 1023 aaKnown RBP11.63□□□□□ -0.55
RFX1-204ENST00000588885 JUNDP17535 347 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 CKMT2P17540 419 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 SERPINA4P29622 427 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 IGFALSP35858 605 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 CSNK1DP48730 415 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 ACADVLP49748 655 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 THOP1P52888 689 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 MAXP61244 160 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 ELP6Q0PNE2 266 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 ZNF211Q13398 564 aaPredicted RBP11.63□□□□□ -0.55
RFX1-204ENST00000588885 C1orf61Q13536 156 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 ZNF235Q14590 738 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 RFTN1Q14699 578 aaPredicted RBP11.63□□□□□ -0.55
RFX1-204ENST00000588885 GRM3Q14832 879 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 IRF4Q15306 451 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 TMCO4Q5TGY1 634 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 BRAT1Q6PJG6 821 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 DAAM2Q86T65 1068 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 DCP2Q8IU60 420 aaKnown RBP11.63□□□□□ -0.55
RFX1-204ENST00000588885 GALNT15Q8N3T1 639 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 PGBD5Q8N414 524 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 ATPAF2Q8N5M1 289 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.63□□□□□ -0.55
RFX1-204ENST00000588885 MDM1Q8TC05 714 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 LMX1AQ8TE12 382 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 PDCD6IPQ8WUM4 868 aaKnown RBP11.63□□□□□ -0.55
RFX1-204ENST00000588885 ASB12Q8WXK4 309 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 TSC1Q92574 1164 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 ZNF592Q92610 1267 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 TUBGCP5Q96RT8 1024 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 NAPGQ99747 312 aaPredicted RBP11.63□□□□□ -0.55
RFX1-204ENST00000588885 TCEAL2Q9H3H9 227 aaPredicted RBP11.63□□□□□ -0.55
RFX1-204ENST00000588885 PACSIN2Q9UNF0 486 aaPredicted RBP11.63□□□□□ -0.55
RFX1-204ENST00000588885 LHX6Q9UPM6 363 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 ATP8A1Q9Y2Q0 1164 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 CHD6Q8TD26 2715 aa11.63□□□□□ -0.55
RFX1-204ENST00000588885 TRPM6Q9BX84 2022 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 KNTC1P50748 2209 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 TSPAN11A1L157 253 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 TRABD2BA6NFA1 517 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 MAFKO60675 156 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 PEX11BO96011 259 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 PCCBP05166 539 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 C6P13671 934 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 HOXB3P14651 431 aaPredicted RBP11.62□□□□□ -0.55
RFX1-204ENST00000588885 HOXB1P14653 301 aaPredicted RBP11.62□□□□□ -0.55
RFX1-204ENST00000588885 JUPP14923 745 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 COMTP21964 271 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 CASQ1P31415 396 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 RENBPP51606 427 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 ARSEP51690 589 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 PFN3P60673 137 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 DAB2P98082 770 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 ITKQ08881 620 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 NSUN2Q08J23 767 aaKnown RBP eCLIP11.62□□□□□ -0.55
RFX1-204ENST00000588885 EIF2B5Q13144 721 aaKnown RBP11.62□□□□□ -0.55
RFX1-204ENST00000588885 DPYSL3Q14195 570 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 LRRC14Q15048 493 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 SMAD1Q15797 465 aaKnown RBP11.62□□□□□ -0.55
RFX1-204ENST00000588885 WSCD2Q2TBF2 565 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 PROX2Q3B8N5 592 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 FAXCQ5TGI0 409 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 RD3Q7Z3Z2 195 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 PARGQ86W56 976 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 SYCE1Q8N0S2 351 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 RBFAQ8N0V3 343 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 TP53I13Q8NBR0 393 aaPredicted RBP11.62□□□□□ -0.55
RFX1-204ENST00000588885 DENND6BQ8NEG7 585 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 ZNF548Q8NEK5 533 aaPredicted RBP11.62□□□□□ -0.55
RFX1-204ENST00000588885 PCDH19Q8TAB3 1148 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 FAM174AQ8TBP5 190 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 HCAR2Q8TDS4 363 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 NSMCE1Q8WV22 266 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 PSKH2Q96QS6 385 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 C1QTNF7Q9BXJ2 289 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 NOD2Q9HC29 1040 aa11.62□□□□□ -0.55
RFX1-204ENST00000588885 PNMA8BQ9ULN7 279 aaPredicted RBP11.62□□□□□ -0.55
RFX1-204ENST00000588885 OR1A2Q9Y585 309 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms