RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-211	ENST00000588200	PRPSAP2	O60256	369 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	LRCH4	O75427	683 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	FTL	P02792	175 aa	Predicted RBP	13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	MYBL1	P10243	752 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	MIP	P30301	263 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	HSPA9	P38646	679 aa	Known RBP	13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	RGR	P47804	291 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	TMPRSS3	P57727	454 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	KIAA1024L	P59773	190 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	SRP54	P61011	504 aa	Known RBP	13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	AP1S1	P61966	158 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	RALGDS	Q12967	914 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	C1orf61	Q13536	156 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	DPYSL2	Q16555	572 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	BOLA3	Q53S33	107 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	RALGPS1	Q5JS13	557 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	LRRC73	Q5JTD7	316 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	BROX	Q5VW32	411 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	LIPI	Q6XZB0	460 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	DPPA4	Q7L190	304 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	GKN2	Q86XP6	184 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	AOPEP	Q8N6M6	819 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	GPR156	Q8NFN8	814 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	WDR36	Q8NI36	951 aa	Known RBP	13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	TRIM11	Q96F44	468 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	WDR92	Q96MX6	357 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	KCTD15	Q96SI1	283 aa	Predicted RBP	13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	CCDC3	Q9BQI4	270 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	HAUS4	Q9H6D7	363 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	APPL1	Q9UKG1	709 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	ACSL6	Q9UKU0	697 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	KIF26B	Q2KJY2	2108 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200		A0A1B0GTH6	734 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	DDX3X	O00571	662 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	MUSK	O15146	869 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	SOCS5	O75159	536 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	TNF	P01375	233 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	CTSE	P14091	401 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	CR2	P20023	1033 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	KEL	P23276	732 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	RBMS1	P29558	406 aa	Known RBP	13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	PDX1	P52945	283 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	RHD	Q02161	417 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	BCL2L1	Q07817	233 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	C19orf57	Q0VDD7	668 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	CCDC173	Q0VFZ6	552 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	FILIP1L	Q4L180	1135 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	CFAP58	Q5T655	872 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	ENPP7	Q6UWV6	458 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	ARL14	Q8N4G2	192 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	NPW	Q8N729	165 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	NETO2	Q8NC67	525 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	KCNE4	Q8WWG9	221 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	ATXN7L3B	Q96GX2	97 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	CELF6	Q96J87	481 aa	Known RBP	13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	ZWILCH	Q9H900	591 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	GPATCH2L	Q9NWQ4	482 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	CWC15	Q9P013	229 aa	Known RBP	13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	SEPT3	Q9UH03	358 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	SATB2	Q9UPW6	733 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	COQ6	Q9Y2Z9	468 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	PPIL1	Q9Y3C6	166 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	PCDHGA7	Q9Y5G6	932 aa		13.41	□□□□□ -0.26
PKN1-211	ENST00000588200	UNC13C	Q8NB66	2214 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	BOD1L1	Q8NFC6	3051 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	CCDC187	A0A096LP49	1063 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	PDE2A	O00408	941 aa	Predicted RBP	13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	DAPK3	O43293	454 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	C1QL1	O75973	258 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	RECQL5	O94762	991 aa	Predicted RBP	13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	PEX11B	O96011	259 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	CELA2B	P08218	269 aa	Predicted RBP	13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	ITGA2B	P08514	1039 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	GM2A	P17900	193 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	TEAD1	P28347	426 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	CCKBR	P32239	447 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	SPIDR	Q14159	915 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	NR1I3	Q14994	352 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	ASIC2	Q16515	512 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	PCSK4	Q6UW60	755 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	POLN	Q7Z5Q5	900 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	LRRC49	Q8IUZ0	686 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	HID1	Q8IV36	788 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	NIPA2	Q8N8Q9	360 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	TEKT4	Q8WW24	435 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	SYN2	Q92777	582 aa	Predicted RBP	13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	TSACC	Q96A04	125 aa	Predicted RBP	13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	FUBP1	Q96AE4	644 aa	Known RBP	13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	CINP	Q9BW66	212 aa	Predicted RBP	13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	SP110	Q9HB58	689 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	TMEM63C	Q9P1W3	806 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	KL	Q9UEF7	1012 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	CNOT8	Q9UFF9	292 aa	Known RBP	13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	PCSK1N	Q9UHG2	260 aa		13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	BZW2	Q9Y6E2	419 aa	Known RBP	13.4	□□□□□ -0.26
PKN1-211	ENST00000588200	SCN8A	Q9UQD0	1980 aa		13.4	□□□□□ -0.27
PKN1-211	ENST00000588200	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.4	□□□□□ -0.27
PKN1-211	ENST00000588200	COL6A6	A6NMZ7	2263 aa		13.39	□□□□□ -0.27
PKN1-211	ENST00000588200	TMEM202	A6NGA9	273 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms