RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 HTR1BP28222 390 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 PCK1P35558 622 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 LSSP48449 732 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 ZNF135P52742 658 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-205ENST00000587774 TLE3Q04726 772 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 NSUN2Q08J23 767 aaKnown RBP eCLIP18.88■□□□□ 0.61
TRIM47-205ENST00000587774 SLC10A7Q0GE19 358 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 MTM1Q13496 603 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 ELOCQ15369 112 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 TDRD12Q587J7 1177 aaKnown RBP18.88■□□□□ 0.61
TRIM47-205ENST00000587774 FIGNQ5HY92 759 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 TMCO4Q5TGY1 634 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 RBM44Q6ZP01 1051 aaKnown RBP18.88■□□□□ 0.61
TRIM47-205ENST00000587774 FSTL5Q8N475 847 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-205ENST00000587774 PAF1Q8N7H5 531 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 ATXN7L3BQ96GX2 97 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 HIC2Q96JB3 615 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 WDR92Q96MX6 357 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 ZNF578Q96N58 590 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-205ENST00000587774 PSKH2Q96QS6 385 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 LGMNQ99538 433 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 CCDC3Q9BQI4 270 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 EDEM3Q9BZQ6 932 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 ASCL3Q9NQ33 180 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.88■□□□□ 0.61
TRIM47-205ENST00000587774 ETNK2Q9NVF9 386 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 SIRPGQ9P1W8 387 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 KLQ9UEF7 1012 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 SEPT3Q9UH03 358 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 DOLKQ9UPQ8 538 aa18.88■□□□□ 0.61
TRIM47-205ENST00000587774 HELZ2Q9BYK8 2649 aaKnown RBP18.87■□□□□ 0.61
TRIM47-205ENST00000587774 H3BRJ5 948 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 TRAFD1O14545 582 aaPredicted RBP18.87■□□□□ 0.61
TRIM47-205ENST00000587774 TCEA3O75764 348 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 ALPIP09923 528 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 CTSEP14091 401 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 GM2AP17900 193 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 SCNN1BP51168 640 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 PDX1P52945 283 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 SRP54P61011 504 aaKnown RBP18.87■□□□□ 0.61
TRIM47-205ENST00000587774 AP1S1P61966 158 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 LBRQ14739 615 aaKnown RBP18.87■□□□□ 0.61
TRIM47-205ENST00000587774 HGSNATQ68CP4 663 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 ESRP1Q6NXG1 681 aaKnown RBP18.87■□□□□ 0.61
TRIM47-205ENST00000587774 LIPIQ6XZB0 460 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 DPPA4Q7L190 304 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 RD3Q7Z3Z2 195 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 LSMEM2Q8N112 164 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 LZTR1Q8N653 840 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 ARL10Q8N8L6 244 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 ZNF248Q8NDW4 579 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 TPCN2Q8NHX9 752 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 HSPH1Q92598 858 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 NAF1Q96HR8 494 aaKnown RBP18.87■□□□□ 0.61
TRIM47-205ENST00000587774 PADI4Q9UM07 663 aa18.87■□□□□ 0.61
TRIM47-205ENST00000587774 TTC24A2A3L6 582 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-205ENST00000587774 CFAP69A5D8W1 941 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 RECQL5O94762 991 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-205ENST00000587774 AMPD1P23109 780 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 ARL4AP40617 200 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 ERVPABLB-1P60509 514 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 ZNF235Q14590 738 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 TXNRD3NBQ6F5E7 133 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 TMCO3Q6UWJ1 677 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 POLNQ7Z5Q5 900 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 ATL2Q8NHH9 583 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 FUBP1Q96AE4 644 aaKnown RBP18.86■□□□□ 0.61
TRIM47-205ENST00000587774 ZNF599Q96NL3 588 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 CSPG4P5Q96PW8 444 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 UBL7Q96S82 380 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-205ENST00000587774 SYNDIG1Q9H7V2 258 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 FGF22Q9HCT0 170 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 GULP1Q9UBP9 304 aa18.86■□□□□ 0.61
TRIM47-205ENST00000587774 PMS2P1A4D2B8 440 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 TMEM202A6NGA9 273 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 A8MX80 341 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 PEX11BO96011 259 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 RARAP10276 462 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 PBX1P40424 430 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 RENBPP51606 427 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 KIAA1024LP59773 190 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 POLR2LP62875 67 aaKnown RBP18.85■□□□□ 0.61
TRIM47-205ENST00000587774 SLC25A11Q02978 314 aaKnown RBP18.85■□□□□ 0.61
TRIM47-205ENST00000587774 SPIDRQ14159 915 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 LVRNQ6Q4G3 990 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 LUZP1Q86V48 1076 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 GKN2Q86XP6 184 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 PELI3Q8N2H9 469 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 PGBD5Q8N414 524 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 SCG3Q8WXD2 468 aaKnown RBP18.85■□□□□ 0.61
TRIM47-205ENST00000587774 OR1E3Q8WZA6 343 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 CCDC74AQ96AQ1 378 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 GRAMD1AQ96CP6 724 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 BTBD6Q96KE9 485 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 RBM15Q96T37 977 aaKnown RBP eCLIP18.85■□□□□ 0.617e-9■■■□□ 15.8
TRIM47-205ENST00000587774 THAP2Q9H0W7 228 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 MRPL40Q9NQ50 206 aaKnown RBP18.85■□□□□ 0.61
TRIM47-205ENST00000587774 THSD1Q9NS62 852 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 RABGEF1Q9UJ41 708 aa18.85■□□□□ 0.61
TRIM47-205ENST00000587774 ZNF106Q9H2Y7 1883 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms