RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.86■□□□□ 0.13
NCLN-203ENST00000587740 ENTPD2Q9Y5L3 495 aa15.86■□□□□ 0.13
NCLN-203ENST00000587740 TLN1Q9Y490 2541 aaKnown RBP15.85■□□□□ 0.13
NCLN-203ENST00000587740 LRRD1A4D1F6 860 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 POM121BA6NF01 834 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 NEMP2A6NFY4 417 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 ARHGAP42A6NI28 874 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 CDRT15L2A8MXV6 281 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 K7ERQ8 282 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 KDELR3O43731 214 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 KRT1P04264 644 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 SRCP12931 536 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 IL4RP24394 825 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 AKT2P31751 481 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 CHRNA3P32297 505 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 DUSP3P51452 185 aaPredicted RBP15.85■□□□□ 0.13
NCLN-203ENST00000587740 SLC20A2Q08357 652 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 MMRN1Q13201 1228 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 FGL2Q14314 439 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 FZD2Q14332 565 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 CDKN3Q16667 212 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 TMEM259Q4ZIN3 620 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 ANKRD20A8PQ5CZ79 823 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 GUSBP11Q6P575 273 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 SYCE1Q8N0S2 351 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 ATP11CQ8NB49 1132 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 CHST14Q8NCH0 376 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 ZNF548Q8NEK5 533 aaPredicted RBP15.85■□□□□ 0.13
NCLN-203ENST00000587740 OR2A12Q8NGT7 310 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 RAPGEF5Q92565 580 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 HMCESQ96FZ2 354 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 CELF6Q96J87 481 aaKnown RBP15.85■□□□□ 0.13
NCLN-203ENST00000587740 DUSP23Q9BVJ7 150 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 LRRC19Q9H756 370 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 USP29Q9HBJ7 922 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 GUCA1BQ9UMX6 200 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 HS3ST2Q9Y278 367 aa15.85■□□□□ 0.13
NCLN-203ENST00000587740 UBR5O95071 2799 aaPredicted RBP15.84■□□□□ 0.13
NCLN-203ENST00000587740 GRID2IPA4D2P6 1211 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 ZSCAN5CA6NGD5 496 aaPredicted RBP15.84■□□□□ 0.13
NCLN-203ENST00000587740 KPNA3O00505 521 aaPredicted RBP15.84■□□□□ 0.13
NCLN-203ENST00000587740 EFSO43281 561 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 PALMO75781 387 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 CSF2P04141 144 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 RBMS1P29558 406 aaKnown RBP15.84■□□□□ 0.13
NCLN-203ENST00000587740 SERPINB6P35237 376 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 CLCN6P51797 869 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 GEMIN4P57678 1058 aaKnown RBP15.84■□□□□ 0.13
NCLN-203ENST00000587740 CLN3Q13286 438 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 SERINC3Q13530 473 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 TPRG1LQ5T0D9 272 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 CRTC1Q6UUV9 634 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 LINGO4Q6UY18 593 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 VSIG1Q86XK7 387 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 EXD3Q8N9H8 876 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 TMIEQ8NEW7 156 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 ZNF830Q96NB3 372 aaPredicted RBP15.84■□□□□ 0.13
NCLN-203ENST00000587740 MAK16Q9BXY0 300 aaKnown RBP15.84■□□□□ 0.13
NCLN-203ENST00000587740 SLC39A8Q9C0K1 460 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 ETNK2Q9NVF9 386 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 AMFRQ9UKV5 643 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 PPP2R2CQ9Y2T4 447 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 PCDHGA8Q9Y5G5 932 aa15.84■□□□□ 0.13
NCLN-203ENST00000587740 BSNQ9UPA5 3926 aa15.83■□□□□ 0.13
NCLN-203ENST00000587740 CXorf51AA0A1B0GTR3 108 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 CPED1A4D0V7 1026 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 EME2A4GXA9 379 aaPredicted RBP15.83■□□□□ 0.12
NCLN-203ENST00000587740 A6NNZ2 444 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 ZNF487B1APH4 448 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 DFFAO00273 331 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 RAD51BO15315 384 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 SMAD6O43541 496 aaKnown RBP15.83■□□□□ 0.12
NCLN-203ENST00000587740 ZMPSTE24O75844 475 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 PCDH8O95206 1070 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 NME1P15531 152 aaKnown RBP15.83■□□□□ 0.12
NCLN-203ENST00000587740 SERPINH1P50454 418 aaKnown RBP15.83■□□□□ 0.12
NCLN-203ENST00000587740 PAPOLAP51003 745 aaKnown RBP15.83■□□□□ 0.12
NCLN-203ENST00000587740 HNRNPKP61978 463 aaKnown RBP eCLIP15.83■□□□□ 0.128e-7■■■□□ 18
NCLN-203ENST00000587740 ARF5P84085 180 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 PERM1Q5SV97 790 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 ZCCHC8Q6NZY4 707 aaKnown RBP15.83■□□□□ 0.12
NCLN-203ENST00000587740 ZNF662Q6ZS27 426 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 ERN2Q76MJ5 926 aaKnown RBP15.83■□□□□ 0.12
NCLN-203ENST00000587740 EFL1Q7Z2Z2 1120 aaKnown RBP15.83■□□□□ 0.12
NCLN-203ENST00000587740 PTAR1Q7Z6K3 402 aaPredicted RBP15.83■□□□□ 0.12
NCLN-203ENST00000587740 LRRC57Q8N9N7 239 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 PCDH19Q8TAB3 1148 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 RNF25Q96BH1 459 aaPredicted RBP15.83■□□□□ 0.12
NCLN-203ENST00000587740 RNF157Q96PX1 679 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 KLC2Q9H0B6 622 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 LZTFL1Q9NQ48 299 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 HS3ST3A1Q9Y663 406 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 ANKRD36A6QL64 1941 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 DOPEY2Q9Y3R5 2298 aa15.83■□□□□ 0.12
NCLN-203ENST00000587740 SPTY2D1-AS1A0A0U1RR47 76 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 CTNNA1P35221 906 aaKnown RBP15.82■□□□□ 0.12
NCLN-203ENST00000587740 PDX1P52945 283 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 LINC00303Q3SY05 128 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 ARSIQ5FYB1 569 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 AFMIDQ63HM1 303 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms