RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ARSEP51690 589 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 ADPRHP54922 357 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TBX4P57082 545 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 NXPH1P58417 271 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 EIF3EP60228 445 aaKnown RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 CXADRP78310 365 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 INSM1Q01101 510 aaPredicted RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 OTUD4Q01804 1114 aaKnown RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 DEUP1Q05D60 604 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 SNX1Q13596 522 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 NOMO1Q15155 1222 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 C15orf59Q2T9L4 293 aaPredicted RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 HNRNPA1L2Q32P51 320 aaKnown RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 PITRM1Q5JRX3 1037 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 BRMS1LQ5PSV4 323 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 DENND2CQ68D51 928 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 SLC9A4Q6AI14 798 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TBC1D3GQ6DHY5 549 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TBC1D3CQ6IPX1 549 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TRNP1Q6NT89 227 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 KANSL1Q7Z3B3 1105 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 BNIPLQ7Z465 357 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 RELL1Q8IUW5 271 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TBC1D3Q8IZP1 549 aaPredicted RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 DEFB106AQ8N104 65 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 ARFGAP1Q8N6T3 406 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 ACTL9Q8TC94 416 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 FBXO25Q8TCJ0 367 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 UBLCP1Q8WVY7 318 aaPredicted RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 ATG4AQ8WYN0 398 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TTC17Q96AE7 1141 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 FCRL2Q96LA5 508 aaPredicted RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 TTC25Q96NG3 672 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TRIM31Q9BZY9 425 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 SEMA4CQ9C0C4 833 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 FAM204AQ9H8W3 233 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 PPCSQ9HAB8 311 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 CPNE5Q9HCH3 593 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 PCDH18Q9HCL0 1135 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 ABCC13Q9NSE7 274 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 OLA1Q9NTK5 396 aaKnown RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 UCKL1Q9NWZ5 548 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 SUN2Q9UH99 717 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 ANAPC5Q9UJX4 755 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 SARDHQ9UL12 918 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 DNPEPQ9ULA0 475 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 NAALADL1Q9UQQ1 740 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 SNX24Q9Y343 169 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 DOCK9Q9BZ29 2069 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.93□□□□□ -1.14
VMP1-204ENST00000587259 LRRC72A6NJI9 287 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 HMGB1P1B2RPK0 211 aaPredicted RBP7.93□□□□□ -1.14
VMP1-204ENST00000587259 M0QYT0 321 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 TLR4O00206 839 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 DNALI1O14645 258 aaPredicted RBP7.93□□□□□ -1.14
VMP1-204ENST00000587259 PPP1R12AO14974 1030 aaPredicted RBP7.93□□□□□ -1.14
VMP1-204ENST00000587259 EIF3HO15372 352 aaKnown RBP eCLIP7.93□□□□□ -1.14
VMP1-204ENST00000587259 FFAR2O15552 330 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 SIGLEC6O43699 453 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 IL1BP01584 269 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 MPOP05164 745 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 NUDT17P0C025 328 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 MYZAPP0CAP1 466 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 RBP3P10745 1247 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 SLC2A3P11169 496 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 GLDCP23378 1020 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 MZF1P28698 734 aaPredicted RBP7.93□□□□□ -1.14
VMP1-204ENST00000587259 ATP5DP30049 168 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 DRD3P35462 400 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 HNF1BP35680 557 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 HSD17B3P37058 310 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 GGCXP38435 758 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 KCNJ1P48048 391 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 HCAR3P49019 387 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 SLC11A2P49281 568 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 IRAK1P51617 712 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 PMS2P54278 862 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 ST8SIA6P61647 398 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 MRPS25P82663 173 aaKnown RBP7.93□□□□□ -1.14
VMP1-204ENST00000587259 TLE3Q04726 772 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 ZBTB16Q05516 673 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 DHX9Q08211 1270 aaKnown RBP7.93□□□□□ -1.14
VMP1-204ENST00000587259 IFFO1Q0D2I5 559 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 CDH18Q13634 790 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 P3H1Q32P28 736 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 INAVAQ3KP66 663 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 ATP13A4Q4VNC1 1196 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 ANKRD20A8PQ5CZ79 823 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 SYPL2Q5VXT5 272 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 RAP1GAP2Q684P5 730 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 TXNRD3NBQ6F5E7 133 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 MSANTD2Q6P1R3 559 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 LRRC69Q6ZNQ3 347 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 CYP4V2Q6ZWL3 525 aaPredicted RBP7.93□□□□□ -1.14
VMP1-204ENST00000587259 USP30Q70CQ3 517 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 TAC4Q86UU9 113 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 SPACA3Q8IXA5 215 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 LGI2Q8N0V4 545 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 ARFGAP2Q8N6H7 521 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms