RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 HCAR2Q8TDS4 363 aa17.02■□□□□ 0.32
HMG20B-215ENST00000585741 SIPA1Q96FS4 1042 aa17.02■□□□□ 0.32
HMG20B-215ENST00000585741 SERPINB12Q96P63 405 aa17.02■□□□□ 0.32
HMG20B-215ENST00000585741 SRPK1Q96SB4 655 aaKnown RBP17.02■□□□□ 0.32
HMG20B-215ENST00000585741 OMDQ99983 421 aa17.02■□□□□ 0.32
HMG20B-215ENST00000585741 PARD6BQ9BYG5 372 aa17.02■□□□□ 0.32
HMG20B-215ENST00000585741 RSPH9Q9H1X1 276 aaPredicted RBP17.02■□□□□ 0.32
HMG20B-215ENST00000585741 ZSCAN32Q9NX65 697 aa17.02■□□□□ 0.32
HMG20B-215ENST00000585741 DKK3Q9UBP4 350 aa17.02■□□□□ 0.32
HMG20B-215ENST00000585741 NCKAP1Q9Y2A7 1128 aa17.02■□□□□ 0.32
HMG20B-215ENST00000585741 C16orf96A6NNT2 1141 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 ANKRD66B4E2M5 251 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 TRAFD1O14545 582 aaPredicted RBP17.01■□□□□ 0.31
HMG20B-215ENST00000585741 PPFIA2O75334 1257 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 ERLIN1O75477 346 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 PDHA1P08559 390 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 CYP2A6P11509 494 aaPredicted RBP17.01■□□□□ 0.31
HMG20B-215ENST00000585741 C5AR1P21730 350 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 ITGB7P26010 798 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 TNFRSF8P28908 595 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 SLC8A1P32418 973 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 ADRA1AP35348 466 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 NEK3P51956 506 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 MTAPQ13126 283 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 LAMB3Q13751 1172 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 SEPT6Q14141 434 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 SIRPB2Q5JXA9 342 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 KIAA1211LQ6NV74 962 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 WDR93Q6P2C0 686 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 RANBP10Q6VN20 620 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 ZCCHC9Q8N567 271 aaKnown RBP17.01■□□□□ 0.31
HMG20B-215ENST00000585741 EIF1ADQ8N9N8 165 aaKnown RBP17.01■□□□□ 0.31
HMG20B-215ENST00000585741 BLOC1S5Q8TDH9 187 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 HMGB4Q8WW32 186 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.01■□□□□ 0.31
HMG20B-215ENST00000585741 IER2Q9BTL4 223 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 CHRDQ9H2X0 955 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 CASS4Q9NQ75 786 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 PIH1D1Q9NWS0 290 aaKnown RBP17.01■□□□□ 0.31
HMG20B-215ENST00000585741 SCML1Q9UN30 329 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 MAD1L1Q9Y6D9 718 aa17.01■□□□□ 0.31
HMG20B-215ENST00000585741 A0A1W2PQF6 199 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 SDR42E2A6NKP2 422 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 UPK3BL1B0FP48 263 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 BHMG1C9JSJ3 638 aaPredicted RBP17■□□□□ 0.31
HMG20B-215ENST00000585741 UPK3BL2E5RIL1 263 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 NEMP1O14524 444 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 TPH1P17752 444 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 CTPS1P17812 591 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 GRIA1P42261 906 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 CHRNA4P43681 627 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 VSNL1P62760 191 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 FAM193AP78312 1265 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 ZBTB16Q05516 673 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 PDIA2Q13087 525 aaKnown RBP17■□□□□ 0.31
HMG20B-215ENST00000585741 NAA30Q147X3 362 aaPredicted RBP17■□□□□ 0.31
HMG20B-215ENST00000585741 RSPO4Q2I0M5 234 aaPredicted RBP17■□□□□ 0.31
HMG20B-215ENST00000585741 DENND2CQ68D51 928 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 ZDHHC24Q6UX98 284 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 CCNI2Q6ZMN8 369 aaPredicted RBP17■□□□□ 0.31
HMG20B-215ENST00000585741 MAMSTRQ6ZN01 415 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 ERN2Q76MJ5 926 aaKnown RBP17■□□□□ 0.31
HMG20B-215ENST00000585741 SPEM1Q8N4L4 309 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 PPHLN1Q8NEY8 458 aaKnown RBP17■□□□□ 0.31
HMG20B-215ENST00000585741 NSMCE3Q96MG7 304 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 TRIB3Q96RU7 358 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 IL22Q9GZX6 179 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 ARNT2Q9HBZ2 717 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 HACD3Q9P035 362 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 SARDHQ9UL12 918 aa17■□□□□ 0.31
HMG20B-215ENST00000585741 MUC22E2RYF6 1773 aaPredicted RBP17■□□□□ 0.31
HMG20B-215ENST00000585741 MID1O15344 667 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 EIF3HO15372 352 aaKnown RBP eCLIP16.99■□□□□ 0.31
HMG20B-215ENST00000585741 CTIFO43310 598 aaKnown RBP16.99■□□□□ 0.31
HMG20B-215ENST00000585741 FZD6O60353 706 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 RNASEH2AO75792 299 aaKnown RBP16.99■□□□□ 0.31
HMG20B-215ENST00000585741 CRTAMO95727 393 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 ATXN1LP0C7T5 689 aaKnown RBP16.99■□□□□ 0.31
HMG20B-215ENST00000585741 CHRM1P11229 460 aaPredicted RBP16.99■□□□□ 0.31
HMG20B-215ENST00000585741 MGAT1P26572 445 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 SUOXP51687 545 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 COPAP53621 1224 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 RPS14P62263 151 aaKnown RBP16.99■□□□□ 0.31
HMG20B-215ENST00000585741 ELP6Q0PNE2 266 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 MTM1Q13496 603 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 ARHGEF7Q14155 803 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 IHHQ14623 411 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 SLMAPQ14BN4 828 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 QPCTQ16769 361 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 UGP2Q16851 508 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 PKN3Q6P5Z2 889 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 TMEM92Q6UXU6 159 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 GLT6D1Q7Z4J2 308 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 HDDC3Q8N4P3 179 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 PIH1D2Q8WWB5 315 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 ECHDC3Q96DC8 303 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 GPR63Q9BZJ6 419 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 SAYSD1Q9NPB0 183 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 ZDHHC18Q9NUE0 388 aa16.99■□□□□ 0.31
HMG20B-215ENST00000585741 ARGLU1Q9NWB6 273 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms