RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 WDR92Q96MX6 357 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 SYNDIG1Q9H7V2 258 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 FAM207AQ9NSI2 230 aaPredicted RBP14.56□□□□□ -0.08
SDF2-202ENST00000585428 UBA2Q9UBT2 640 aaPredicted RBP14.56□□□□□ -0.08
SDF2-202ENST00000585428 SIK3Q9Y2K2 1263 aa14.56□□□□□ -0.08
SDF2-202ENST00000585428 CYSRT1A8MQ03 144 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 PYCARD-AS1I3L0S3 204 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 TNFRSF10CO14798 259 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 FGF10O15520 208 aaPredicted RBP14.55□□□□□ -0.08
SDF2-202ENST00000585428 RECQL5O94762 991 aaPredicted RBP14.55□□□□□ -0.08
SDF2-202ENST00000585428 WISP1O95388 367 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 ITGB2P05107 769 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 ITGB6P18564 788 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 HTR7P34969 479 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 RGRP47804 291 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 NSUN2Q08J23 767 aaKnown RBP eCLIP14.55□□□□□ -0.08
SDF2-202ENST00000585428 SRSF6Q13247 344 aaKnown RBP14.55□□□□□ -0.08
SDF2-202ENST00000585428 HLTFQ14527 1009 aaKnown RBP eCLIP14.55□□□□□ -0.08
SDF2-202ENST00000585428 KRT31Q15323 416 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 CERCAMQ5T4B2 595 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 AFMIDQ63HM1 303 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 LIPIQ6XZB0 460 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 TMPRSS9Q7Z410 1059 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 SRLQ86TD4 932 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 CCNJLQ8IV13 435 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 SFTPA2Q8IWL1 248 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 Q8N9G6 341 aaPredicted RBP14.55□□□□□ -0.08
SDF2-202ENST00000585428 FAM46DQ8NEK8 389 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 OR56A4Q8NGH8 313 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 ECHDC3Q96DC8 303 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 SGF29Q96ES7 293 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 NCAPGQ9BPX3 1015 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 CNPY3Q9BT09 278 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 SLC39A8Q9C0K1 460 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 DONSONQ9NYP3 566 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 LRIT1Q9P2V4 623 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 ATP8A1Q9Y2Q0 1164 aa14.55□□□□□ -0.08
SDF2-202ENST00000585428 NUDT21O43809 227 aaKnown RBP14.54□□□□□ -0.08
SDF2-202ENST00000585428 SLC28A2O43868 658 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 PRKCGP05129 697 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 PCCBP05166 539 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 JMJD7P0C870 316 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 LIPCP11150 499 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 GM2AP17900 193 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 PAPOLAP51003 745 aaKnown RBP14.54□□□□□ -0.08
SDF2-202ENST00000585428 KIAA1024LP59773 190 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 B4GALNT1Q00973 533 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 RALGDSQ12967 914 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 USP53Q70EK8 1073 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 SPRED1Q7Z699 444 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 TAF8Q7Z7C8 310 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 DTX1Q86Y01 620 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 JAMLQ86YT9 394 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 TSEN2Q8NCE0 465 aaKnown RBP14.54□□□□□ -0.08
SDF2-202ENST00000585428 PDXPQ96GD0 296 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 NSMCE3Q96MG7 304 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 LGR4Q9BXB1 951 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 B3GNT4Q9C0J1 378 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 TMEM168Q9H0V1 697 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 MRPL40Q9NQ50 206 aaKnown RBP14.54□□□□□ -0.08
SDF2-202ENST00000585428 STARD5Q9NSY2 213 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 PISDQ9UG56 409 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 LOXL2Q9Y4K0 774 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 RNF215Q9Y6U7 377 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 COL6A6A6NMZ7 2263 aa14.54□□□□□ -0.08
SDF2-202ENST00000585428 LRRC10BA6NIK2 292 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 TRAFD1O14545 582 aaPredicted RBP14.53□□□□□ -0.08
SDF2-202ENST00000585428 B4GAT1O43505 415 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 FUCA1P04066 466 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 ITIH1P19827 911 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 ETV5P41161 510 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 OGDHQ02218 1023 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 C14orf28Q4W4Y0 310 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 PNCKQ6P2M8 343 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 C17orf82Q86X59 251 aaPredicted RBP14.53□□□□□ -0.08
SDF2-202ENST00000585428 SLITRK4Q8IW52 837 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 CBARPQ8N350 705 aaPredicted RBP14.53□□□□□ -0.08
SDF2-202ENST00000585428 CCL4L1Q8NHW4 92 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 MCEEQ96PE7 176 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 CMKLR1Q99788 373 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 AGPAT1Q99943 283 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 SEMA3CQ99985 751 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 ATP13A3Q9H7F0 1226 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 FGF22Q9HCT0 170 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 SEPT10Q9P0V9 454 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 BOD1L1Q8NFC6 3051 aa14.53□□□□□ -0.08
SDF2-202ENST00000585428 PRAMEF33A0A0G2JMD5 474 aa14.52□□□□□ -0.09
SDF2-202ENST00000585428 A0A1W2PQC6 194 aa14.52□□□□□ -0.09
SDF2-202ENST00000585428 C9orf172C9J069 976 aa14.52□□□□□ -0.09
SDF2-202ENST00000585428 CACNB4O00305 520 aaPredicted RBP14.52□□□□□ -0.09
SDF2-202ENST00000585428 PRAMEF10O60809 474 aa14.52□□□□□ -0.09
SDF2-202ENST00000585428 PALMO75781 387 aa14.52□□□□□ -0.09
SDF2-202ENST00000585428 KELP23276 732 aa14.52□□□□□ -0.09
SDF2-202ENST00000585428 CSRP3P50461 194 aa14.52□□□□□ -0.09
SDF2-202ENST00000585428 POLR2LP62875 67 aaKnown RBP14.52□□□□□ -0.09
SDF2-202ENST00000585428 NFATC3Q12968 1075 aa14.52□□□□□ -0.09
SDF2-202ENST00000585428 KIF26BQ2KJY2 2108 aa14.52□□□□□ -0.09
SDF2-202ENST00000585428 FKBP15Q5T1M5 1219 aa14.52□□□□□ -0.09
SDF2-202ENST00000585428 ACAD10Q6JQN1 1059 aa14.52□□□□□ -0.09
SDF2-202ENST00000585428 DNAJC24Q6P3W2 148 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms