RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 SESN2P58004 480 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 RPS14P62263 151 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 POLR2LP62875 67 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SATB1Q01826 763 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 DHX9Q08211 1270 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 BBS9Q3SYG4 887 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 DNAJC21Q5F1R6 531 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CERCAMQ5T4B2 595 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 FAM46CQ5VWP2 391 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 BRAT1Q6PJG6 821 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CEP128Q6ZU80 1094 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CENPUQ71F23 418 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 AGGF1Q8N302 714 aaeCLIP16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 LPCAT1Q8NF37 534 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PJA1Q8NG27 643 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ARRDC3Q96B67 414 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 POLR3BQ9NW08 1133 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SIT1Q9Y3P8 196 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 OTOGLQ3ZCN5 2332 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 UQCRHLA0A096LP55 91 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 A0A0J9YYE9 177 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 C16orf96A6NNT2 1141 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 KPNA3O00505 521 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CPP00450 1065 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 TRBC1P01850 177 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 UQCRHP07919 91 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SP9P0CG40 484 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ITGB7P26010 798 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 GRIA4P48058 902 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 METAP1P53582 386 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 EPHB1P54762 984 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PDIA2Q13087 525 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MTM1Q13496 603 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 BRD3Q15059 726 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CRY1Q16526 586 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CFAP58Q5T655 872 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SYT13Q7L8C5 426 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 TMPRSS6Q8IU80 811 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 RELL1Q8IUW5 271 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 KIAA2013Q8IYS2 634 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 NDUFAF2Q8N183 169 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MPP5Q8N3R9 675 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 AENQ8WTP8 325 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SMIM14Q96QK8 99 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MKRN2Q9H000 416 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SAYSD1Q9NPB0 183 aa16.43■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MAGEB16A2A368 324 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 BANF1O75531 89 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ADH1BP00325 375 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CTPS1P17812 591 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 C5AR1P21730 350 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MAGEA4P43358 317 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 RPS9P46781 194 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PSMD8P48556 350 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CST6Q15828 149 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 UGP2Q16851 508 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 POM121L1PQ3SYA9 428 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PCID2Q5JVF3 399 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ZNF776Q68DI1 518 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 TTC7BQ86TV6 843 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CCDC25Q86WR0 208 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 IGDCC3Q8IVU1 814 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 C1orf210Q8IVY1 113 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PAF1Q8N7H5 531 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 BRSK1Q8TDC3 778 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 LRRC39Q96DD0 335 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SCRN2Q96FV2 425 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PPP1R16AQ96I34 528 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 RANBP9Q96S59 729 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 HDAC8Q9BY41 377 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 TXLNGYQ9BZA5 131 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 IL22Q9GZX6 179 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CHRDQ9H2X0 955 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MAGEE1Q9HCI5 957 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SYBUQ9NX95 663 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 TEX264Q9Y6I9 313 aa16.42■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MID1O15344 667 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ADRA1DP25100 572 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 HNF1BP35680 557 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ELK3P41970 407 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ABL2P42684 1182 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 DGKEP52429 567 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CRADDP78560 199 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SLMAPQ14BN4 828 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PTPRRQ15256 657 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CDKN3Q16667 212 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 HP1BP3Q5SSJ5 553 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ARMC3Q5W041 872 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 DENND2CQ68D51 928 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 EMBQ6PCB8 327 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ERN2Q76MJ5 926 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PARS2Q7L3T8 475 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MDGA1Q8NFP4 955 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MCCC1Q96RQ3 725 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 LYSMD1Q96S90 227 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SRPK1Q96SB4 655 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 EBNA1BP2Q99848 306 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 WDR83Q9BRX9 315 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 KIFC1Q9BW19 673 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 POLMQ9NP87 494 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms