RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PIP5K1CO60331 668 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 CNPP09543 421 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 RNF224P0DH78 156 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 MCM3P25205 808 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 HALP42357 657 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 CLCN3P51790 818 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 SLC12A1Q13621 1099 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 OASLQ15646 514 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 LDHAL6AQ6ZMR3 332 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 MON1AQ86VX9 555 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 CHD1LQ86WJ1 897 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 GDPD5Q8WTR4 605 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 FIG4Q92562 907 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 RNF183Q96D59 192 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 TTC14Q96N46 770 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 TWNKQ96RR1 684 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 YME1L1Q96TA2 773 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 LITAFQ99732 161 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 PYM1Q9BRP8 204 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 PPCSQ9HAB8 311 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 KLHL1Q9NR64 748 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 IFT80Q9P2H3 777 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 SLCO3A1Q9UIG8 710 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 SIX4Q9UIU6 781 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 POU2F3Q9UKI9 436 aa3.39□□□□□ -1.87
SMCHD1-206ENST00000581631 FAM90A7PA6NKC0 464 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 SH2D7A6NKC9 451 aaPredicted RBP3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 FAM90A22PA8MWA6 464 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 FAM90A12PA8MX19 464 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 FAM90A23PA8MXZ1 464 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 PER2O15055 1255 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 CEP104O60308 925 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 CHRM4P08173 479 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 AZU1P20160 251 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 PMP22Q01453 160 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 TNFAIP1Q13829 316 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 SYT16Q17RD7 645 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 FBXO47Q5MNV8 452 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 ZNF772Q68DY9 489 aaPredicted RBP3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 IL20RBQ6UXL0 311 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 LURAP1LQ8IV03 231 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 DENND6AQ8IWF6 608 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 MB21D2Q8IYB1 491 aaPredicted RBP3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 ARRDC2Q8TBH0 407 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 RAB40AQ8WXH6 277 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 CNOT9Q92600 299 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 TRIM63Q969Q1 353 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 MTBPQ96DY7 904 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 CSF3RQ99062 836 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 EPHX3Q9H6B9 360 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 ALKBH4Q9NXW9 302 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 SLC9A2Q9UBY0 812 aa3.38□□□□□ -1.87
SMCHD1-206ENST00000581631 C16orf97H3BN30 126 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 MID1O15344 667 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 HSPA12AO43301 675 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 ATP2C2O75185 946 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 TFPIP10646 304 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 TTKP33981 857 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 CENPAP49450 140 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 NAA25Q14CX7 972 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 EDRF1Q3B7T1 1238 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 ZNF497Q6ZNH5 498 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 MOB3CQ70IA8 216 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 SLC26A9Q7LBE3 791 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 PRSS45Q7RTY3 260 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 CCDC105Q8IYK2 499 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 CPXM2Q8N436 756 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 ANKRD42Q8N9B4 389 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 USP38Q8NB14 1042 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 ZMIZ2Q8NF64 920 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 TANKQ92844 425 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 SH3KBP1Q96B97 665 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 REEP2Q9BRK0 252 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 HERPUD2Q9BSE4 406 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 ISCA1Q9BUE6 129 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 NOX4Q9NPH5 578 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 SPATS2LQ9NUQ6 558 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 GPR52Q9Y2T5 361 aa3.37□□□□□ -1.87
SMCHD1-206ENST00000581631 C17orf113A0A1B0GUU1 675 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 hDV102S1A0JD36 115 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 TYW5A2RUC4 315 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 PABPN1LA6NDY0 278 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 ATP1A1P05023 1023 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 CETPP11597 493 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 SRCP12931 536 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 LIFRP42702 1097 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 TBL3Q12788 808 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 TDGQ13569 410 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 RUNX2Q13950 521 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 EFR3AQ14156 821 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 LPAL2Q16609 132 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 CES5AQ6NT32 575 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 ARHGAP11AQ6P4F7 1023 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 DSG4Q86SJ6 1040 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 ADGRG6Q86SQ4 1221 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 SFR1Q86XK3 245 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 TMEM170AQ8WVE7 144 aa3.36□□□□□ -1.87
SMCHD1-206ENST00000581631 ZSCAN31Q96LW9 406 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms