RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 AKR1B15C9JRZ8 316 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-211ENST00000581536 TRIM38O00635 465 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 ENC1O14682 589 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 TNFSF14O43557 240 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 NEBLO76041 1014 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 TM7SF2O76062 418 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 DKK1O94907 266 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 TMEM253P0C7T8 217 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 DGKAP23743 735 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 CSNK1DP48730 415 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 ARRB1P49407 418 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-211ENST00000581536 LIG3P49916 1009 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 NSUN2Q08J23 767 aaKnown RBP eCLIP9.78□□□□□ -0.84
TOP3A-211ENST00000581536 SLC10A2Q12908 348 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-211ENST00000581536 TRIM14Q14142 442 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 FZD2Q14332 565 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 IHHQ14623 411 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 HADHQ16836 314 aaKnown RBP9.78□□□□□ -0.84
TOP3A-211ENST00000581536 UGP2Q16851 508 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 ANKRD20A8PQ5CZ79 823 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 PTAR1Q7Z6K3 402 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-211ENST00000581536 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.78□□□□□ -0.84
TOP3A-211ENST00000581536 PQLC3Q8N755 202 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 TC2NQ8N9U0 490 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 TP53I13Q8NBR0 393 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-211ENST00000581536 KCTD6Q8NC69 237 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 CTNNBL1Q8WYA6 563 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-211ENST00000581536 GATA6Q92908 595 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 CNDP2Q96KP4 475 aaKnown RBP9.78□□□□□ -0.84
TOP3A-211ENST00000581536 SMIM14Q96QK8 99 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 CINPQ9BW66 212 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-211ENST00000581536 TCEAL2Q9H3H9 227 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-211ENST00000581536 NOD2Q9HC29 1040 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 UVRAGQ9P2Y5 699 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 DOLKQ9UPQ8 538 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 APOBEC2Q9Y235 224 aaKnown RBP9.78□□□□□ -0.84
TOP3A-211ENST00000581536 ZFHX4Q86UP3 3567 aa9.78□□□□□ -0.84
TOP3A-211ENST00000581536 KMT2BQ9UMN6 2715 aaPredicted RBP9.77□□□□□ -0.84
TOP3A-211ENST00000581536 A0A0U1RQS6 177 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 TRAFD1O14545 582 aaPredicted RBP9.77□□□□□ -0.85
TOP3A-211ENST00000581536 FPGTO14772 594 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 FFAR2O15552 330 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 SIGLEC6O43699 453 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 MAGEC1O60732 1142 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 KRT37O76014 449 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 TRIM16O95361 564 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 TPM1P09493 284 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 BMP2P12643 396 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 TNNT1P13805 278 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 GM2AP17900 193 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 XPAP23025 273 aaPredicted RBP9.77□□□□□ -0.85
TOP3A-211ENST00000581536 KDELR1P24390 212 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 IGFALSP35858 605 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 ZNF135P52742 658 aaPredicted RBP9.77□□□□□ -0.85
TOP3A-211ENST00000581536 PFN3P60673 137 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 OVGP1Q12889 678 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 EIF2B5Q13144 721 aaKnown RBP9.77□□□□□ -0.85
TOP3A-211ENST00000581536 PDE1CQ14123 709 aaPredicted RBP9.77□□□□□ -0.85
TOP3A-211ENST00000581536 ST3GAL2Q16842 350 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 WSCD2Q2TBF2 565 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 NCBP2-AS2Q69YL0 99 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 SARM1Q6SZW1 724 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 DHRS13Q6UX07 377 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 B4GALNT4Q76KP1 1039 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 PLA2G15Q8NCC3 412 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 HCAR2Q8TDS4 363 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 CXorf40AQ8TE69 158 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 ZNF641Q96N77 438 aaPredicted RBP9.77□□□□□ -0.85
TOP3A-211ENST00000581536 PSKH2Q96QS6 385 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 GPR27Q9NS67 375 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 DNAJC28Q9NX36 388 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 FTSJ1Q9UET6 329 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 MSRB2Q9Y3D2 182 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 NEUROG3Q9Y4Z2 214 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 ARHGEF17Q96PE2 2063 aaPredicted RBP9.77□□□□□ -0.85
TOP3A-211ENST00000581536 NBEAQ8NFP9 2946 aa9.77□□□□□ -0.85
TOP3A-211ENST00000581536 CFAP47Q6ZTR5 3102 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 CEP295Q9C0D2 2601 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 SPTY2D1-AS1A0A0U1RR47 76 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 TSPAN11A1L157 253 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 A6NNZ2 444 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 SCAMP1O15126 338 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 MFSD11O43934 449 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 LZTS3O60299 673 aaPredicted RBP9.76□□□□□ -0.85
TOP3A-211ENST00000581536 PIAS2O75928 621 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 CAPNS1P04632 268 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 PROS1P07225 676 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 CR2P20023 1033 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 MAGEA1P43355 309 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 GBE1Q04446 702 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 BCL2L1Q07817 233 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 RALGDSQ12967 914 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 C1orf61Q13536 156 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 RFTN1Q14699 578 aaPredicted RBP9.76□□□□□ -0.85
TOP3A-211ENST00000581536 GRM3Q14832 879 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 PAFAH1B3Q15102 231 aaKnown RBP9.76□□□□□ -0.85
TOP3A-211ENST00000581536 IRF4Q15306 451 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 LLGL1Q15334 1064 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 TMCO4Q5TGY1 634 aa9.76□□□□□ -0.85
TOP3A-211ENST00000581536 MARC1Q5VT66 337 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms