RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.58□□□□□ -1.68
NF1-220ENST00000581113 PLEKHH2Q8IVE3 1493 aa4.58□□□□□ -1.68
NF1-220ENST00000581113 ITSN2Q9NZM3 1697 aa4.58□□□□□ -1.68
NF1-220ENST00000581113 ABCA6Q8N139 1617 aa4.58□□□□□ -1.68
NF1-220ENST00000581113 SAMD9LQ8IVG5 1584 aa4.58□□□□□ -1.68
NF1-220ENST00000581113 SYCP2Q9BX26 1530 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 RGS11O94810 467 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 SOX30O94993 753 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 F9P00740 461 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 PTMAP06454 111 aaKnown RBP4.57□□□□□ -1.68
NF1-220ENST00000581113 HOXC6P09630 235 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 MYF6P23409 242 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 Q0VFX4 171 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 ITGADQ13349 1161 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 PPP2R5BQ15173 497 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 PRICKLE4Q2TBC4 344 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 SLC9B1Q4ZJI4 515 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 DCAF6Q58WW2 860 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 ACAD10Q6JQN1 1059 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 CCDC70Q6NSX1 233 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.57□□□□□ -1.68
NF1-220ENST00000581113 ARMC8Q8IUR7 673 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 CCDC105Q8IYK2 499 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 PARP16Q8N5Y8 322 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 TSPYL6Q8N831 410 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 OTULINQ96BN8 352 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 KLHL29Q96CT2 875 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 SIN3AQ96ST3 1273 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 CLK4Q9HAZ1 481 aaKnown RBP4.57□□□□□ -1.68
NF1-220ENST00000581113 PREBQ9HCU5 417 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 KCND2Q9NZV8 630 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 MPP6Q9NZW5 540 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 SARDHQ9UL12 918 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 CARD8Q9Y2G2 431 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 CDC42BPAQ5VT25 1732 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 EHBP1L1Q8N3D4 1523 aa4.57□□□□□ -1.68
NF1-220ENST00000581113 ZNF644Q9H582 1327 aaPredicted RBP4.57□□□□□ -1.68
NF1-220ENST00000581113 ACAA1P09110 424 aaPredicted RBP4.56□□□□□ -1.68
NF1-220ENST00000581113 THBS3P49746 956 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 NANOS2P60321 138 aaKnown RBP4.56□□□□□ -1.68
NF1-220ENST00000581113 CRYZQ08257 329 aaKnown RBP4.56□□□□□ -1.68
NF1-220ENST00000581113 NEXNQ0ZGT2 675 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 HNRNPA0Q13151 305 aaKnown RBP4.56□□□□□ -1.68
NF1-220ENST00000581113 SIM2Q14190 667 aaPredicted RBP4.56□□□□□ -1.68
NF1-220ENST00000581113 CTTNQ14247 550 aaKnown RBP4.56□□□□□ -1.68
NF1-220ENST00000581113 SLC4A8Q2Y0W8 1093 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 H1FNTQ75WM6 255 aaPredicted RBP4.56□□□□□ -1.68
NF1-220ENST00000581113 ZDHHC17Q8IUH5 632 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 SFTPA2Q8IWL1 248 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 C9orf106Q8NAJ2 232 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 OR14A16Q8NHC5 309 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 NFKBIDQ8NI38 313 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 LYZL4Q96KX0 146 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 MXRA8Q9BRK3 442 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 ZPBPQ9BS86 351 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 TMEM204Q9BSN7 226 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 JMJD4Q9H9V9 463 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 CYSLTR2Q9NS75 346 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 A3GALT2U3KPV4 340 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 UHRF1BP1Q6BDS2 1440 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 CNTLNQ9NXG0 1405 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 KAT6BQ8WYB5 2073 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 RPGRIP1LQ68CZ1 1315 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 KIDINS220Q9ULH0 1771 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 A0A0U1RQF3 1178 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 LACTBL1A8MY62 500 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 TIMM23O14925 209 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 BCAT2O15382 392 aaPredicted RBP4.56□□□□□ -1.68
NF1-220ENST00000581113 SMAD6O43541 496 aaKnown RBP4.56□□□□□ -1.68
NF1-220ENST00000581113 HEXAP06865 529 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 ABCD1P33897 745 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 COPB2P35606 906 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 CTCFP49711 727 aaPredicted RBP4.56□□□□□ -1.68
NF1-220ENST00000581113 TERF1P54274 439 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 CASP6P55212 293 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 ADORA2A-AS1P86434 159 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 DSC1Q08554 894 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 PTP4A2Q12974 167 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 TIAM1Q13009 1591 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 KCTD2Q14681 263 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 SHBQ15464 509 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 MAPRE1Q15691 268 aaKnown RBP4.56□□□□□ -1.68
NF1-220ENST00000581113 SOWAHAQ2M3V2 549 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 TYW3Q6IPR3 259 aaKnown RBP4.56□□□□□ -1.68
NF1-220ENST00000581113 CPLX2Q6PUV4 134 aaKnown RBP4.56□□□□□ -1.68
NF1-220ENST00000581113 NOXA1Q86UR1 476 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 FJX1Q86VR8 437 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 TDRPQ86YL5 185 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 TTC30BQ8N4P2 665 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 ARRDC2Q8TBH0 407 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 NEUROG1Q92886 237 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 TXNDC15Q96J42 360 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 ZNF479Q96JC4 524 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 PPM1MQ96MI6 270 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 SLC26A6Q9BXS9 759 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 NAALADL1Q9UQQ1 740 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 FAM96BQ9Y3D0 163 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 PAM16Q9Y3D7 125 aa4.56□□□□□ -1.68
NF1-220ENST00000581113 ATP7AQ04656 1500 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms