RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 PEX11BO96011 259 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 SERPINC1P01008 464 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 SERPING1P05155 500 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 TSHRP16473 764 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 HNRNPH3P31942 346 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 UCNP55089 124 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 CDH6P55285 790 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 SEMG2Q02383 582 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 LBRQ14739 615 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 PPP6R3Q5H9R7 873 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 FAXCQ5TGI0 409 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 CAVIN1Q6NZI2 390 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 TMCO3Q6UWJ1 677 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 LIPIQ6XZB0 460 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 RBM44Q6ZP01 1051 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 SLC35F3Q8IY50 421 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 BBS5Q8N3I7 341 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 NPWQ8N729 165 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 ARL10Q8N8L6 244 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 ZNF248Q8NDW4 579 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 SNRNP27Q8WVK2 155 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 HNRNPLLQ8WVV9 542 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 CELF6Q96J87 481 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 EXOC2Q96KP1 924 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 WDR92Q96MX6 357 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 NUDCD1Q96RS6 583 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 UBL7Q96S82 380 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 MGME1Q9BQP7 344 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 TRIM7Q9C029 511 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 CLPBQ9H078 707 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 GPATCH2LQ9NWQ4 482 aa14.58□□□□□ -0.08
SMARCE1-216ENST00000580419 NTN3O00634 580 aaPredicted RBP14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 ATMINO43313 823 aaPredicted RBP14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 MAFKO60675 156 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 CSO75390 466 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 CYP1A2P05177 515 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 PTMSP20962 102 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 CES1P23141 567 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 RGRP47804 291 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 ADKP55263 362 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 PCBP4P57723 403 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 SKOR1P84550 965 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 RALGDSQ12967 914 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 EIF3IQ13347 325 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 INPP5AQ14642 412 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 TSR1Q2NL82 804 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 ALG11Q2TAA5 492 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 DEFB133Q30KQ1 61 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 SOWAHCQ53LP3 525 aaPredicted RBP14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 ALG1LQ6GMV1 187 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 GUSBP11Q6P575 273 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 OGFOD3Q6PK18 319 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 C19orf48Q6RUI8 117 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 KDM7AQ6ZMT4 941 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 NLRP8Q86W28 1048 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 ZSWIM9Q86XI8 627 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 GKN2Q86XP6 184 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 CSPG4P5Q96PW8 444 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 WRAP53Q9BUR4 548 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 DPH1Q9BZG8 443 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 THSD1Q9NS62 852 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 PNMA8BQ9ULN7 279 aaPredicted RBP14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 PADI4Q9UM07 663 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 CFAP46Q8IYW2 2715 aa14.57□□□□□ -0.08
SMARCE1-216ENST00000580419 USP12O75317 370 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 RECQL5O94762 991 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 ELFN1P0C7U0 828 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 TGM2P21980 687 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 IL1R2P27930 398 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 CLDN6P56747 220 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 SRP54P61011 504 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 FANCCQ00597 558 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 CLPPQ16740 277 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 EFL1Q7Z2Z2 1120 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 RBFAQ8N0V3 343 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 TEX26Q8N6G2 289 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 CCDC97Q96F63 343 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 WBP1Q96G27 269 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 LIN37Q96GY3 246 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 COQ10AQ96MF6 247 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 MCCC1Q96RQ3 725 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 ASCL3Q9NQ33 180 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 HAUS2Q9NVX0 235 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 APPL1Q9UKG1 709 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 RALYQ9UKM9 306 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 PHTF1Q9UMS5 762 aa14.56□□□□□ -0.08
SMARCE1-216ENST00000580419 TEX51A0A1B0GUA7 166 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 MYO1FO00160 1098 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 DFFAO00273 331 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 CACNB4O00305 520 aaPredicted RBP14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 TNFP01375 233 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 RARAP10276 462 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 KRT10P13645 584 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 CTSEP14091 401 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 ITIH2P19823 946 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 SCNN1BP51168 640 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 UBASH3AP57075 661 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 SLC25A11Q02978 314 aaKnown RBP14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 TLE3Q04726 772 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 DPTQ07507 201 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms