RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 ATMQ13315 3056 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 TSPAN11A1L157 253 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 INSIG1O15503 277 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 SLC28A2O43868 658 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 PALMO75781 387 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 PIGNO95427 931 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 ITGB2P05107 769 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 PCCBP05166 539 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 CELA2BP08218 269 aaPredicted RBP18.01■□□□□ 0.47
MKS1-209ENST00000580127 HOXC4P09017 264 aaPredicted RBP18.01■□□□□ 0.47
MKS1-209ENST00000580127 JAM2P57087 298 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 PTP4A2Q12974 167 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 PEX6Q13608 980 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 OGFOD3Q6PK18 319 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 SRLQ86TD4 932 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 OR56A4Q8NGH8 313 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 VOPP1Q96AW1 172 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 EXOC2Q96KP1 924 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 FOXP3Q9BZS1 431 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 KLC2Q9H0B6 622 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 DPEP2Q9H4A9 486 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 LHX3Q9UBR4 397 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 PISDQ9UG56 409 aa18.01■□□□□ 0.47
MKS1-209ENST00000580127 PRAMEF11O60813 436 aa18■□□□□ 0.47
MKS1-209ENST00000580127 LIPCP11150 499 aa18■□□□□ 0.47
MKS1-209ENST00000580127 RENBPP51606 427 aa18■□□□□ 0.47
MKS1-209ENST00000580127 PDX1P52945 283 aa18■□□□□ 0.47
MKS1-209ENST00000580127 BCL2L1Q07817 233 aa18■□□□□ 0.47
MKS1-209ENST00000580127 NSUN2Q08J23 767 aaKnown RBP eCLIP18■□□□□ 0.47
MKS1-209ENST00000580127 TCEA2Q15560 299 aa18■□□□□ 0.47
MKS1-209ENST00000580127 MANEAQ5SRI9 462 aa18■□□□□ 0.47
MKS1-209ENST00000580127 B3GNT8Q7Z7M8 397 aa18■□□□□ 0.47
MKS1-209ENST00000580127 CAMK1DQ8IU85 385 aa18■□□□□ 0.47
MKS1-209ENST00000580127 NETO2Q8NC67 525 aa18■□□□□ 0.47
MKS1-209ENST00000580127 GPR156Q8NFN8 814 aa18■□□□□ 0.47
MKS1-209ENST00000580127 KIAA1524Q8TCG1 905 aa18■□□□□ 0.47
MKS1-209ENST00000580127 PCDHB18PQ96TA0 734 aa18■□□□□ 0.47
MKS1-209ENST00000580127 SEMA4CQ9C0C4 833 aa18■□□□□ 0.47
MKS1-209ENST00000580127 CHMP5Q9NZZ3 219 aa18■□□□□ 0.47
MKS1-209ENST00000580127 LRIT1Q9P2V4 623 aa18■□□□□ 0.47
MKS1-209ENST00000580127 GTF3C3Q9Y5Q9 886 aa18■□□□□ 0.47
MKS1-209ENST00000580127 AHCTF1Q8WYP5 2266 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 A0A1W2PQM1 296 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 PMS2P1A4D2B8 440 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 CCP110O43303 1012 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 NUDT21O43809 227 aaKnown RBP17.99■□□□□ 0.47
MKS1-209ENST00000580127 ELFN1P0C7U0 828 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 MMP12P39900 470 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 KIAA1024LP59773 190 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 BIRC2Q13490 618 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 RFTN1Q14699 578 aaPredicted RBP17.99■□□□□ 0.47
MKS1-209ENST00000580127 KRT31Q15323 416 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 CERCAMQ5T4B2 595 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 PIM3Q86V86 326 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 MCEEQ96PE7 176 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 AGPAT1Q99943 283 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 CINPQ9BW66 212 aaPredicted RBP17.99■□□□□ 0.47
MKS1-209ENST00000580127 B3GNT4Q9C0J1 378 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 RABGEF1Q9UJ41 708 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 MOSPD1Q9UJG1 213 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 LOXL2Q9Y4K0 774 aa17.99■□□□□ 0.47
MKS1-209ENST00000580127 COL27A1Q8IZC6 1860 aaPredicted RBP17.99■□□□□ 0.47
MKS1-209ENST00000580127 LRRK1Q38SD2 2015 aa17.98■□□□□ 0.47
MKS1-209ENST00000580127 A0A1W2PQ67 120 aa17.98■□□□□ 0.47
MKS1-209ENST00000580127 J3KR12 359 aa17.98■□□□□ 0.47
MKS1-209ENST00000580127 EEF2KO00418 725 aaKnown RBP17.98■□□□□ 0.47
MKS1-209ENST00000580127 BUB1BO60566 1050 aaPredicted RBP17.98■□□□□ 0.47
MKS1-209ENST00000580127 RECQL5O94762 991 aaPredicted RBP17.98■□□□□ 0.47
MKS1-209ENST00000580127 WISP1O95388 367 aa17.98■□□□□ 0.47
MKS1-209ENST00000580127 CDK11BP21127 795 aaKnown RBP17.98■□□□□ 0.47
MKS1-209ENST00000580127 CD82P27701 267 aa17.98■□□□□ 0.47
MKS1-209ENST00000580127 PAPOLAP51003 745 aaKnown RBP17.98■□□□□ 0.47
MKS1-209ENST00000580127 ZFP36L1Q07352 338 aaKnown RBP17.98■□□□□ 0.47
MKS1-209ENST00000580127 C14orf28Q4W4Y0 310 aa17.98■□□□□ 0.47
MKS1-209ENST00000580127 PRICKLE2Q7Z3G6 844 aa17.98■□□□□ 0.47
MKS1-209ENST00000580127 LRRC19Q9H756 370 aa17.98■□□□□ 0.47
MKS1-209ENST00000580127 A0A1W2PQC6 194 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 RHPN2P1A8MT19 583 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 EFSO43281 561 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 RNF8O76064 485 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 TRIM23P36406 574 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 KLK7P49862 253 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 ZNF135P52742 658 aaPredicted RBP17.97■□□□□ 0.47
MKS1-209ENST00000580127 RPL7AP62424 266 aaKnown RBP17.97■□□□□ 0.47
MKS1-209ENST00000580127 ACOX1Q15067 660 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 CLPPQ16740 277 aaPredicted RBP17.97■□□□□ 0.47
MKS1-209ENST00000580127 PHF19Q5T6S3 580 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 TMCO4Q5TGY1 634 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 CDKAL1Q5VV42 579 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 ACAD10Q6JQN1 1059 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 LIPIQ6XZB0 460 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 MON1BQ7L1V2 547 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 OR1E3Q8WZA6 343 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 FUBP1Q96AE4 644 aaKnown RBP17.97■□□□□ 0.47
MKS1-209ENST00000580127 WDR26Q9H7D7 661 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 SP110Q9HB58 689 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 PDFQ9HBH1 243 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 CYP4F12Q9HCS2 524 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 PARVAQ9NVD7 372 aa17.97■□□□□ 0.47
MKS1-209ENST00000580127 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms