RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 SRPRAP08240 638 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 MMP2P08253 660 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 HLA-EP13747 358 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 GABRG2P18507 467 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 TNFRSF1AP19438 455 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 OR1E1P30953 314 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 NTSR1P30989 418 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 DRD3P35462 400 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 GJC1P36383 396 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 GARSP41250 739 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 MAGEA9P43362 315 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 PAPOLAP51003 745 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 IFI35P80217 286 aaPredicted RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 IL10RBQ08334 325 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 PPIDQ08752 370 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC10A7Q0GE19 358 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 WASHC5Q12768 1159 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 GRSF1Q12849 480 aaKnown RBP eCLIP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ZBTB17Q13105 803 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF177Q13360 481 aaPredicted RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF211Q13398 564 aaPredicted RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 CDH18Q13634 790 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 LRRC32Q14392 662 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 UBXN2BQ14CS0 331 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 NOMO1Q15155 1222 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 OASLQ15646 514 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 HADHQ16836 314 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF423Q2M1K9 1284 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 HNRNPA1L2Q32P51 320 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 PARP15Q460N3 678 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 HSF5Q4G112 596 aaPredicted RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 INO80DQ53TQ3 878 aaPredicted RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 TFDP3Q5H9I0 405 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 C9orf64Q5T6V5 341 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 PAPD7Q5XG87 772 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 C22orf39Q6P5X5 142 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 TSSK4Q6SA08 328 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 LRRC31Q6UY01 552 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 LINGO4Q6UY18 593 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 FAM214BQ7L5A3 538 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC35F6Q8N357 371 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 RASGEF1CQ8N431 466 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 CCDC33Q8N5R6 958 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF366Q8N895 744 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF513Q8N8E2 541 aaPredicted RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF557Q8N988 423 aaPredicted RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 DTWD2Q8NBA8 298 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 TXNDC5Q8NBS9 432 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ZBTB44Q8NCP5 570 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 MDGA1Q8NFP4 955 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 OR2A12Q8NGT7 310 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC35B2Q8TB61 432 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 PBXIP1Q96AQ6 731 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 HDAC11Q96DB2 347 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 CELF6Q96J87 481 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 RPL10LQ96L21 214 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 MRGPRX1Q96LB2 322 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ALPK1Q96QP1 1244 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 PSKH2Q96QS6 385 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 IL12RB2Q99665 862 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ORAI3Q9BRQ5 295 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 TRIM56Q9BRZ2 755 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 OSBPL8Q9BZF1 889 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 TSGA10Q9BZW7 698 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 MKRN2Q9H000 416 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC6A17Q9H1V8 727 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 RSPH9Q9H1X1 276 aaPredicted RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 CARD9Q9H257 536 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 CATSPERBQ9H7T0 1116 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 USP29Q9HBJ7 922 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 LUC7LQ9NQ29 371 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 CACNA2D2Q9NY47 1150 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 DDX56Q9NY93 547 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 USP36Q9P275 1121 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 SAE1Q9UBE0 346 aaPredicted RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 SERGEFQ9UGK8 458 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 EBF1Q9UH73 591 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC12A6Q9UHW9 1150 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 SARDHQ9UL12 918 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 R3HDM2Q9Y2K5 976 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 ZKSCAN5Q9Y2L8 839 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 MRPS17Q9Y2R5 130 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 RAD54BQ9Y620 910 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 COL5A1P20908 1838 aaPredicted RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 DMXL1Q9Y485 3027 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 PTPRBP23467 1997 aa3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 SNRNP200O75643 2136 aaKnown RBP3.85□□□□□ -1.79
SMARCE1-215ENST00000578995 DNAH14Q0VDD8 3507 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 CCDC163A0A0D9SF12 145 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 TEX51A0A1B0GUA7 166 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 TBC1D3BA6NDS4 549 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 APOC4-APOC2K7ER74 178 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 TRAFD1O14545 582 aaPredicted RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ENC1O14682 589 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 NPC1O15118 1278 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ALOX15BO15296 676 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 INSIG1O15503 277 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 TIMM44O43615 452 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 FZD6O60353 706 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 CST8O60676 142 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms