RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 IQCGQ9H095 443 aaKnown RBP20.36■□□□□ 0.85
SMG8-203ENST00000578922 MKS1Q9NXB0 559 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 LHX3Q9UBR4 397 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 NKX1-2Q9UD57 310 aaPredicted RBP20.36■□□□□ 0.85
SMG8-203ENST00000578922 A0A0G2JND7 137 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 CCL22O00626 93 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 BUD23O43709 281 aaKnown RBP20.36■□□□□ 0.85
SMG8-203ENST00000578922 DLDP09622 509 aaKnown RBP20.36■□□□□ 0.85
SMG8-203ENST00000578922 NEFHP12036 1026 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 HLA-FP30511 346 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 VIPR2P41587 438 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 CTSOP43234 321 aaPredicted RBP20.36■□□□□ 0.85
SMG8-203ENST00000578922 OVGP1Q12889 678 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 PLEKHG6Q3KR16 790 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 LY6G5CQ5SRR4 150 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 ASTLQ6HA08 431 aaPredicted RBP20.36■□□□□ 0.85
SMG8-203ENST00000578922 FAM111AQ96PZ2 611 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 SMIM14Q96QK8 99 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 KCTD3Q9Y597 815 aa20.36■□□□□ 0.85
SMG8-203ENST00000578922 HEATR9A2RTY3 570 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 COPEO14579 308 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 SERPINB4P48594 390 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 SERPINB9P50453 376 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 USP4Q13107 963 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 MSLNQ13421 630 aaPredicted RBP20.35■□□□□ 0.85
SMG8-203ENST00000578922 TAF11Q15544 211 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.35■□□□□ 0.85
SMG8-203ENST00000578922 NAT16Q8N8M0 369 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 IRF7Q92985 503 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 RMDN1Q96DB5 314 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 MTBPQ96DY7 904 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 NAF1Q96HR8 494 aaKnown RBP20.35■□□□□ 0.85
SMG8-203ENST00000578922 MMADHCQ9H3L0 296 aaPredicted RBP20.35■□□□□ 0.85
SMG8-203ENST00000578922 DENND2DQ9H6A0 471 aaPredicted RBP20.35■□□□□ 0.85
SMG8-203ENST00000578922 SFXN1Q9H9B4 322 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 KCNK13Q9HB14 408 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 SPHK2Q9NRA0 654 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 SUFUQ9UMX1 484 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 RFPL1O75677 317 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 PDHA1P08559 390 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 TYRP14679 529 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 GM2AP17900 193 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 ARNTP27540 789 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 ZBTB16Q05516 673 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 INO80DQ53TQ3 878 aaPredicted RBP20.35■□□□□ 0.85
SMG8-203ENST00000578922 RETSATQ6NUM9 610 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.35■□□□□ 0.85
SMG8-203ENST00000578922 TMEM120AQ9BXJ8 343 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 SLC13A1Q9BZW2 595 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 LMAN2LQ9H0V9 348 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 PCMTD2Q9NV79 361 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 RAI2Q9Y5P3 530 aa20.35■□□□□ 0.85
SMG8-203ENST00000578922 LINC01565O15544 149 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 ITGA2BP08514 1039 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 HLA-DPA1P20036 260 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 GP5P40197 560 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 STK19P49842 368 aaPredicted RBP20.34■□□□□ 0.85
SMG8-203ENST00000578922 NAB1Q13506 487 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 PTPRCAPQ14761 206 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 PITRM1Q5JRX3 1037 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 PDPK2PQ6A1A2 396 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 TRIM68Q6AZZ1 485 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 PTCD2Q8WV60 388 aaKnown RBP20.34■□□□□ 0.85
SMG8-203ENST00000578922 RSPRY1Q96DX4 576 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 TRIB3Q96RU7 358 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 SRPK1Q96SB4 655 aaKnown RBP20.34■□□□□ 0.85
SMG8-203ENST00000578922 CPNE1Q99829 537 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 TDRD1Q9BXT4 1180 aaKnown RBP20.34■□□□□ 0.85
SMG8-203ENST00000578922 TREX1Q9NSU2 369 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 ARL5AQ9Y689 179 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 XIRP2A4UGR9 3374 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 TRIM24O15164 1050 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 NDST3O95803 873 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 FGF1P05230 155 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 GCKP35557 465 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 ARCN1P48444 511 aaKnown RBP20.34■□□□□ 0.85
SMG8-203ENST00000578922 TMPRSS15P98073 1019 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 KCNC3Q14003 757 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 FRG1Q14331 258 aaKnown RBP20.34■□□□□ 0.85
SMG8-203ENST00000578922 FUT11Q495W5 492 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 TSTD2Q5T7W7 516 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 DENND6AQ8IWF6 608 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 ADGRG2Q8IZP9 1017 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 LPCAT1Q8NF37 534 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 RAB3IL1Q8TBN0 382 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 CADM1Q9BY67 442 aaKnown RBP20.34■□□□□ 0.85
SMG8-203ENST00000578922 TNKS2Q9H2K2 1166 aa20.34■□□□□ 0.85
SMG8-203ENST00000578922 MRM3Q9HC36 420 aaKnown RBP20.34■□□□□ 0.85
SMG8-203ENST00000578922 PENKP01210 267 aaPredicted RBP20.33■□□□□ 0.85
SMG8-203ENST00000578922 SLC4A1P02730 911 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 POU2F2P09086 479 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 BGNP21810 368 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 WEE1P30291 646 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 CCNFP41002 786 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 PDE1BQ01064 536 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 TRAF2Q12933 501 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 CTBP1Q13363 440 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 PTPRRQ15256 657 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 ATG16L1Q676U5 607 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 C2orf16Q68DN1 1984 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms