RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 DPPA4Q7L190 304 aa12.74□□□□□ -0.37
SSH2-205ENST00000577483 PELI3Q8N2H9 469 aa12.74□□□□□ -0.37
SSH2-205ENST00000577483 FAM181AQ8N9Y4 354 aa12.74□□□□□ -0.37
SSH2-205ENST00000577483 LMX1AQ8TE12 382 aa12.74□□□□□ -0.37
SSH2-205ENST00000577483 RFFLQ8WZ73 363 aa12.74□□□□□ -0.37
SSH2-205ENST00000577483 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
SSH2-205ENST00000577483 FAF2Q96CS3 445 aa12.74□□□□□ -0.37
SSH2-205ENST00000577483 ZNF670Q9BS34 389 aa12.74□□□□□ -0.37
SSH2-205ENST00000577483 NHEJ1Q9H9Q4 299 aaPredicted RBP12.74□□□□□ -0.37
SSH2-205ENST00000577483 SCUBE2Q9NQ36 999 aa12.74□□□□□ -0.37
SSH2-205ENST00000577483 RALYQ9UKM9 306 aaKnown RBP12.74□□□□□ -0.37
SSH2-205ENST00000577483 OR1A2Q9Y585 309 aa12.74□□□□□ -0.37
SSH2-205ENST00000577483 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.73□□□□□ -0.37
SSH2-205ENST00000577483 TMEM110-MUSTN1A8MSY1 372 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 TOR1BO14657 336 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 LZTS3O60299 673 aaPredicted RBP12.73□□□□□ -0.37
SSH2-205ENST00000577483 SOCS5O75159 536 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 RECQL5O94762 991 aaPredicted RBP12.73□□□□□ -0.37
SSH2-205ENST00000577483 CELA2BP08218 269 aaPredicted RBP12.73□□□□□ -0.37
SSH2-205ENST00000577483 ELFN1P0C7U0 828 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 ALPPL2P10696 532 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 MAN1A1P33908 653 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 HNF1BP35680 557 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 HSPA9P38646 679 aaKnown RBP12.73□□□□□ -0.37
SSH2-205ENST00000577483 CYP4F3Q08477 520 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 TARDBPQ13148 414 aaKnown RBP eCLIP12.73□□□□□ -0.371e-7■■■■□ 24.6
SSH2-205ENST00000577483 TBX2Q13207 712 aaPredicted RBP12.73□□□□□ -0.37
SSH2-205ENST00000577483 C1orf61Q13536 156 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 IHHQ14623 411 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 PRRT3Q5FWE3 981 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 MARC1Q5VT66 337 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 ZCCHC8Q6NZY4 707 aaKnown RBP12.73□□□□□ -0.37
SSH2-205ENST00000577483 TEX26Q8N6G2 289 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 PQLC3Q8N755 202 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 SLC35G2Q8TBE7 412 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 PDCD6IPQ8WUM4 868 aaKnown RBP12.73□□□□□ -0.37
SSH2-205ENST00000577483 DUSP23Q9BVJ7 150 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 CLPBQ9H078 707 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 NT5MQ9NPB1 228 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 ZNHIT6Q9NWK9 470 aaKnown RBP12.73□□□□□ -0.37
SSH2-205ENST00000577483 B4GALT6Q9UBX8 382 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 CSNK1G3Q9Y6M4 447 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 CFAP69A5D8W1 941 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 JUPP14923 745 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 LHCGRP22888 699 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 POLR2LP62875 67 aaKnown RBP12.73□□□□□ -0.37
SSH2-205ENST00000577483 GBE1Q04446 702 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 SLC10A2Q12908 348 aaPredicted RBP12.73□□□□□ -0.37
SSH2-205ENST00000577483 MESDQ14696 234 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 NFATC4Q14934 902 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 PDK2Q15119 407 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 PTPRRQ15256 657 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 TCEA2Q15560 299 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 ALG11Q2TAA5 492 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 PAF1Q8N7H5 531 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 PDCD7Q8N8D1 485 aaKnown RBP12.73□□□□□ -0.37
SSH2-205ENST00000577483 KCTD6Q8NC69 237 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 BTN2A2Q8WVV5 523 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 RAPGEF5Q92565 580 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 FUBP1Q96AE4 644 aaKnown RBP12.73□□□□□ -0.37
SSH2-205ENST00000577483 PDXPQ96GD0 296 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 APOOQ9BUR5 198 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 SPASTQ9UBP0 616 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 DKK4Q9UBT3 224 aa12.73□□□□□ -0.37
SSH2-205ENST00000577483 NPIPB15A6NHN6 443 aaPredicted RBP12.72□□□□□ -0.37
SSH2-205ENST00000577483 CASC3O15234 703 aaKnown RBP12.72□□□□□ -0.37
SSH2-205ENST00000577483 CPP00450 1065 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 PDHA1P08559 390 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 KRT7P08729 469 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 TPM1P09493 284 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 TSHRP16473 764 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 PEX5P50542 639 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 HK3P52790 923 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 PPARDQ03181 441 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 MTM1Q13496 603 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 CNGA3Q16281 694 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 CDKN3Q16667 212 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 FAXCQ5TGI0 409 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 GUSBP11Q6P575 273 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 ENPP7Q6UWV6 458 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 BBS5Q8N3I7 341 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 DCBLD1Q8N8Z6 715 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 IFI44Q8TCB0 444 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 MAML1Q92585 1016 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 TSACCQ96A04 125 aaPredicted RBP12.72□□□□□ -0.37
SSH2-205ENST00000577483 TBATAQ96M53 351 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 CCDC42Q96M95 316 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 COQ10AQ96MF6 247 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 SMIM14Q96QK8 99 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 SEMA3CQ99985 751 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 BOCQ9BWV1 1114 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 CLCA2Q9UQC9 943 aa12.72□□□□□ -0.37
SSH2-205ENST00000577483 LOC400499M0QZD8 3231 aa12.71□□□□□ -0.37
SSH2-205ENST00000577483 A0A0U1RQS6 177 aa12.71□□□□□ -0.37
SSH2-205ENST00000577483 C3orf70A6NLC5 250 aaPredicted RBP12.71□□□□□ -0.37
SSH2-205ENST00000577483 LMO7DNF2Z398 122 aa12.71□□□□□ -0.37
SSH2-205ENST00000577483 TPP1O14773 563 aa12.71□□□□□ -0.37
SSH2-205ENST00000577483 FZD6O60353 706 aa12.71□□□□□ -0.37
SSH2-205ENST00000577483 MTA2O94776 668 aa12.71□□□□□ -0.37
SSH2-205ENST00000577483 PGLSO95336 258 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms