RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PTPN20Q4JDL3 420 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 ANKS6Q68DC2 871 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 FAM131BQ86XD5 332 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 ZNF354CQ86Y25 554 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 NLGN4XQ8N0W4 816 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 NLGN4YQ8NFZ3 816 aaPredicted RBP16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 TTYH3Q9C0H2 523 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 PCDH12Q9NPG4 1184 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 PCDHGC3Q9UN70 934 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 LRRK1Q38SD2 2015 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 CXorf51AA0A1B0GTR3 108 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 INSIG1O15503 277 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 TMCC1O94876 653 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 IGSF6O95976 241 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 MAP4P27816 1152 aaKnown RBP16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 KRT9P35527 623 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 TRA2AQ13595 282 aaKnown RBP eCLIP16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 CLPPQ16740 277 aaPredicted RBP16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 ZNF787Q6DD87 383 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 CAPRIN2Q6IMN6 1127 aaKnown RBP16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 KDELC2Q7Z4H8 507 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 HEATR4Q86WZ0 1026 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 ZDHHC1Q8WTX9 485 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 CTRCQ99895 268 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 EFHD1Q9BUP0 239 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 PLCB1Q9NQ66 1216 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 PRDM8Q9NQV8 689 aa16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 PPARGC1AQ9UBK2 798 aaKnown RBP16.36■□□□□ 0.21
CTDNEP1-211ENST00000575783 PSMA7O14818 248 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 PIGNO95427 931 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 ECEL1O95672 775 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 PRKCGP05129 697 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 FGF1P05230 155 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 TCN2P20062 427 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 KELP23276 732 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 PPM1FP49593 454 aaPredicted RBP16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 SUOXP51687 545 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 KIAA1024LP59773 190 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 RHOAP61586 193 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 KRT85P78386 507 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 UGP2Q16851 508 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 ISM2Q6H9L7 571 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 ERAP2Q6P179 960 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 ASB18Q6ZVZ8 466 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 ENOSF1Q7L5Y1 443 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 ZNF438Q7Z4V0 828 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 ZDHHC17Q8IUH5 632 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 EFCAB3Q8N7B9 438 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 OR4D9Q8NGE8 314 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 STARD8Q92502 1023 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 GSDMAQ96QA5 445 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 NCAPGQ9BPX3 1015 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 ZMYND15Q9H091 742 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 MAGEH1Q9H213 219 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 TMEM9Q9P0T7 183 aa16.35■□□□□ 0.21
CTDNEP1-211ENST00000575783 TTLL8A6PVC2 850 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 B4E171 279 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 MKRN2OSH3BPM6 223 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 TNFRSF10CO14798 259 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 KDELR3O43731 214 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 RAMP2O60895 175 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 SEMA7AO75326 666 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 RNF224P0DH78 156 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 COL8A1P27658 744 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 TSPAN7P41732 249 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 RAB15P59190 212 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 MC1RQ01726 317 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 STIM1Q13586 685 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 FAM102AQ5T9C2 384 aaPredicted RBP16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 EXOC2Q96KP1 924 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 CFAP57Q96MR6 1250 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 CRACR2AQ9BSW2 395 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 LGR4Q9BXB1 951 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 CARS2Q9HA77 564 aaKnown RBP16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 OR12D3Q9UGF7 316 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 MFHAS1Q9Y4C4 1052 aa16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTDNEP1-211ENST00000575783 TEX33O43247 280 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 SMC2O95347 1197 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 THRAP10827 490 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 CCNB1P14635 433 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 RHOQP17081 205 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 FLT3P36888 993 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 GPR3P46089 330 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 MAPKAPK2P49137 400 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 COPB1P53618 953 aaKnown RBP16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 APBA1Q02410 837 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 PTK2Q05397 1052 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 NR1D2Q14995 579 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 AGERQ15109 404 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 CFAP58Q5T655 872 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 KLHL10Q6JEL2 608 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 TIPARPQ7Z3E1 657 aaKnown RBP16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 NLRP14Q86W24 1093 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 C17orf82Q86X59 251 aaPredicted RBP16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 NRROSQ86YC3 692 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 TRIM59Q8IWR1 403 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 GALNT11Q8NCW6 608 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 PATE1Q8WXA2 126 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 RTP4Q96DX8 246 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms