RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SOCS5O75159 536 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 ZRANB2O95218 330 aaKnown RBP eCLIP13.33□□□□□ -0.27
RPAIN-216ENST00000575599 HLA-DQB2P05538 268 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 C6P13671 934 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 CTNNA1P35221 906 aaKnown RBP13.33□□□□□ -0.27
RPAIN-216ENST00000575599 ARRB1P49407 418 aaPredicted RBP13.33□□□□□ -0.27
RPAIN-216ENST00000575599 ETF1P62495 437 aaKnown RBP13.33□□□□□ -0.27
RPAIN-216ENST00000575599 POLR2LP62875 67 aaKnown RBP13.33□□□□□ -0.27
RPAIN-216ENST00000575599 TFDP2Q14188 446 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 SUZ12Q15022 739 aaKnown RBP13.33□□□□□ -0.27
RPAIN-216ENST00000575599 PDK1Q15118 436 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 TFDP3Q5H9I0 405 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 RALGPS1Q5JS13 557 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 FAM182AQ5T1J6 154 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 KYAT3Q6YP21 454 aaKnown RBP13.33□□□□□ -0.27
RPAIN-216ENST00000575599 Q6ZSR6 202 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 PEX26Q7Z412 305 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 ABI3BPQ7Z7G0 1075 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 GATAD2AQ86YP4 633 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 RCOR2Q8IZ40 523 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 SLC35F6Q8N357 371 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 DENND6BQ8NEG7 585 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 FATE1Q969F0 183 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 HAUS1Q96CS2 278 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 RBM41Q96IZ5 413 aaKnown RBP13.33□□□□□ -0.27
RPAIN-216ENST00000575599 BMFQ96LC9 184 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 OLFM3Q96PB7 478 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 KLF6Q99612 283 aaPredicted RBP13.33□□□□□ -0.27
RPAIN-216ENST00000575599 C1QTNF7Q9BXJ2 289 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 CEP41Q9BYV8 373 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 SEPT10Q9P0V9 454 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 SAE1Q9UBE0 346 aaPredicted RBP13.33□□□□□ -0.27
RPAIN-216ENST00000575599 AMFRQ9UKV5 643 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 BTBD3Q9Y2F9 522 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 PCDHB9Q9Y5E1 797 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 PCDHGB2Q9Y5G2 931 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 HS3ST3A1Q9Y663 406 aa13.33□□□□□ -0.27
RPAIN-216ENST00000575599 KNL1Q8NG31 2342 aa13.33□□□□□ -0.28
RPAIN-216ENST00000575599 hCG_1818297A0A087WSY0 165 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 CTAGE9A4FU28 777 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 FLRT2O43155 660 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 HTRA2O43464 458 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-216ENST00000575599 LZTS3O60299 673 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-216ENST00000575599 PCDHGA12O60330 932 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 SDC3O75056 442 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 JCHAINP01591 159 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 ITGAVP06756 1048 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 ELFN1P0C7U0 828 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 PECAM1P16284 738 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-216ENST00000575599 EPHA8P29322 1005 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-216ENST00000575599 IGFALSP35858 605 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 LIG3P49916 1009 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 SIM1P81133 766 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-216ENST00000575599 ADCY2Q08462 1091 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 RALGDSQ12967 914 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 ZBTB17Q13105 803 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 IRF4Q15306 451 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 SHBQ15464 509 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 TAZQ16635 292 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 ARMC12Q5T9G4 340 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 N4BP2L1Q5TBK1 243 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-216ENST00000575599 SYT10Q6XYQ8 523 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 NYAP1Q6ZVC0 841 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 SLC22A18ASQ8N1D0 253 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 OXR1Q8N573 874 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 EXD1Q8NHP7 514 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 RHBDD1Q8TEB9 315 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 ASB12Q8WXK4 309 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 LENG8Q96PV6 779 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-216ENST00000575599 ERVMER34-1Q9H9K5 563 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 B4GALT6Q9UBX8 382 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 PCOLCE2Q9UKZ9 415 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 RAI2Q9Y5P3 530 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 CAPN6Q9Y6Q1 641 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 LRRK1Q38SD2 2015 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 CNOT1A5YKK6 2376 aaKnown RBP13.32□□□□□ -0.28
RPAIN-216ENST00000575599 A0A1W2PQ67 120 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 GOLGA8CPA6NN73 597 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 YKT6O15498 198 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 PGLSO95336 258 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 ADRB1P08588 477 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 TGM2P21980 687 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 RABIFP47224 123 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 IFI35P80217 286 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-216ENST00000575599 FOXK2Q01167 660 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 PDE1CQ14123 709 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-216ENST00000575599 INAVAQ3KP66 663 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 ALG1LQ6GMV1 187 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 DPPA4Q7L190 304 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 LRRC57Q8N9N7 239 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 TP53I13Q8NBR0 393 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-216ENST00000575599 KIF18AQ8NI77 898 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 FAM174AQ8TBP5 190 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 UBE2Q2Q8WVN8 375 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 P3H4Q92791 437 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 CENPTQ96BT3 561 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 NAPGQ99747 312 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-216ENST00000575599 HEMGNQ9BXL5 484 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 MBNL1Q9NR56 388 aaKnown RBP13.32□□□□□ -0.28
RPAIN-216ENST00000575599 AMACRQ9UHK6 382 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms