RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 RABEPKQ7Z6M1 372 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 LPCAT1Q8NF37 534 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 C1orf216Q8TAB5 229 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 IFT43Q96FT9 208 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 WRAP53Q9BUR4 548 aaKnown RBP33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 SLC17A9Q9BYT1 436 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 B4GALT6Q9UBX8 382 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 WDR87Q6ZQQ6 2873 aa33.27■■■□□ 2.92
CTDNEP1-209ENST00000574205 PLXNA2O75051 1894 aa33.26■■■□□ 2.92
CTDNEP1-209ENST00000574205 EP300Q09472 2414 aaPredicted RBP33.26■■■□□ 2.92
CTDNEP1-209ENST00000574205 ANKRD66B4E2M5 251 aa33.26■■■□□ 2.91
CTDNEP1-209ENST00000574205 LRP3O75074 770 aa33.26■■■□□ 2.91
CTDNEP1-209ENST00000574205 IFNB1P01574 187 aa33.26■■■□□ 2.91
CTDNEP1-209ENST00000574205 CYP2A6P11509 494 aaPredicted RBP33.26■■■□□ 2.91
CTDNEP1-209ENST00000574205 ACTN2P35609 894 aa33.26■■■□□ 2.91
CTDNEP1-209ENST00000574205 GEMP55040 296 aa33.26■■■□□ 2.91
CTDNEP1-209ENST00000574205 RALGDSQ12967 914 aa33.26■■■□□ 2.91
CTDNEP1-209ENST00000574205 PLA2G2CQ5R387 149 aa33.26■■■□□ 2.91
CTDNEP1-209ENST00000574205 C16orf45Q96MC5 204 aaPredicted RBP33.26■■■□□ 2.91
CTDNEP1-209ENST00000574205 GORASP1Q9BQQ3 440 aa33.26■■■□□ 2.91
CTDNEP1-209ENST00000574205 GOLGA6L10A0A0M3HER8 536 aa33.25■■■□□ 2.91
CTDNEP1-209ENST00000574205 IGLON5A6NGN9 336 aa33.25■■■□□ 2.91
CTDNEP1-209ENST00000574205 MMP20O60882 483 aa33.25■■■□□ 2.91
CTDNEP1-209ENST00000574205 WNT3AP56704 352 aa33.25■■■□□ 2.91
CTDNEP1-209ENST00000574205 CYP1B1Q16678 543 aa33.25■■■□□ 2.91
CTDNEP1-209ENST00000574205 PARP6Q2NL67 630 aa33.25■■■□□ 2.91
CTDNEP1-209ENST00000574205 KDELC2Q7Z4H8 507 aa33.25■■■□□ 2.91
CTDNEP1-209ENST00000574205 CCDC89Q8N998 374 aa33.25■■■□□ 2.91
CTDNEP1-209ENST00000574205 C12orf50Q8NA57 414 aaPredicted RBP33.25■■■□□ 2.91
CTDNEP1-209ENST00000574205 RMDN1Q96DB5 314 aa33.25■■■□□ 2.91
CTDNEP1-209ENST00000574205 HINFPQ9BQA5 517 aa33.25■■■□□ 2.91
CTDNEP1-209ENST00000574205 C1QTNF2Q9BXJ5 285 aa33.25■■■□□ 2.91
CTDNEP1-209ENST00000574205 LRRK1Q38SD2 2015 aa33.25■■■□□ 2.91
CTDNEP1-209ENST00000574205 TM7SF2O76062 418 aa33.24■■■□□ 2.91
CTDNEP1-209ENST00000574205 EPOP01588 193 aa33.24■■■□□ 2.91
CTDNEP1-209ENST00000574205 CTPS1P17812 591 aa33.24■■■□□ 2.91
CTDNEP1-209ENST00000574205 VIPR1P32241 457 aa33.24■■■□□ 2.91
CTDNEP1-209ENST00000574205 TNNT3P45378 269 aaPredicted RBP33.24■■■□□ 2.91
CTDNEP1-209ENST00000574205 LIG3P49916 1009 aa33.24■■■□□ 2.91
CTDNEP1-209ENST00000574205 SEMG2Q02383 582 aa33.24■■■□□ 2.91
CTDNEP1-209ENST00000574205 CREG2Q8IUH2 290 aa33.24■■■□□ 2.91
CTDNEP1-209ENST00000574205 ZCCHC9Q8N567 271 aaKnown RBP33.24■■■□□ 2.91
CTDNEP1-209ENST00000574205 CEP76Q8TAP6 659 aa33.24■■■□□ 2.91
CTDNEP1-209ENST00000574205 ASB12Q8WXK4 309 aa33.24■■■□□ 2.91
CTDNEP1-209ENST00000574205 KLK6Q92876 244 aa33.24■■■□□ 2.91
CTDNEP1-209ENST00000574205 MRGPRX2Q96LB1 330 aa33.24■■■□□ 2.91
CTDNEP1-209ENST00000574205 LOC285095A0A1B0GVY8 99 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 NPIPB15A6NHN6 443 aaPredicted RBP33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 BCAT2O15382 392 aaPredicted RBP33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 SLC31A1O15431 190 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 ALPIP09923 528 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 KCNJ1P48048 391 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 SGCGQ13326 291 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 GALNT3Q14435 633 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 CCDC70Q6NSX1 233 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 LIPIQ6XZB0 460 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 IPMKQ8NFU5 416 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 MAGOHBQ96A72 148 aaKnown RBP33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 SERAC1Q96JX3 654 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 CAPZA3Q96KX2 299 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 FSD1LQ9BXM9 530 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 SLCO1B1Q9Y6L6 691 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 A0A1B0GTW7 788 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 CAPN8A6NHC0 703 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 PRR5-ARHGAP8B1AHC4 643 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 NDST3O95803 873 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 PAK4O96013 591 aaPredicted RBP33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 ELFN1P0C7U0 828 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 C6P13671 934 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 HNRNPA2B1P22626 353 aaKnown RBP33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 RACK1P63244 317 aaKnown RBP33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 FGL2Q14314 439 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 QPCTQ16769 361 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 DUOXA1Q1HG43 343 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 FAM122AQ96E09 287 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 LYSMD1Q96S90 227 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 MLPHQ9BV36 600 aaPredicted RBP33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 TM9SF3Q9HD45 589 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 RNF14Q9UBS8 474 aa33.23■■■□□ 2.91
CTDNEP1-209ENST00000574205 GOLGA6CA6NDK9 693 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 GOLGA6BA6NDN3 693 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 A8MX80 341 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 PRAMEF26H0Y7S4 382 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 GFRA3O60609 400 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 METTL18O95568 372 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 GOLGA6DP0CG33 693 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 HNF1BP35680 557 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 LMNB2Q03252 620 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 SPEM2Q0P670 501 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 CCDC6Q16204 474 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 NAPEPLDQ6IQ20 393 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 GSTA5Q7RTV2 222 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 KLHDC8BQ8IXV7 354 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 ATL2Q8NHH9 583 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 GOLGA6AQ9NYA3 693 aa33.22■■■□□ 2.91
CTDNEP1-209ENST00000574205 FAM186AA6NE01 2351 aa33.21■■■□□ 2.91
CTDNEP1-209ENST00000574205 CACNA1EQ15878 2313 aa33.21■■■□□ 2.91
CTDNEP1-209ENST00000574205 LHCGRP22888 699 aa33.21■■■□□ 2.91
CTDNEP1-209ENST00000574205 PLA2G5P39877 138 aa33.21■■■□□ 2.91
CTDNEP1-209ENST00000574205 AFF3P51826 1226 aaKnown RBP33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms