RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ZFR2Q9UPR6 939 aaKnown RBP11.1□□□□□ -0.63
CHD3-216ENST00000573936 PPIL1Q9Y3C6 166 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 PCDHB9Q9Y5E1 797 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 GON4LQ3T8J9 2241 aa11.1□□□□□ -0.63
CHD3-216ENST00000573936 DSPP15924 2871 aaKnown RBP11.1□□□□□ -0.63
CHD3-216ENST00000573936 LNP1A1A4G5 178 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 TMEM8BA6NDV4 472 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 FZD6O60353 706 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 MAGEC1O60732 1142 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 TM7SF2O76062 418 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 HNRNPA2B1P22626 353 aaKnown RBP11.09□□□□□ -0.63
CHD3-216ENST00000573936 MAT2AP31153 395 aaKnown RBP11.09□□□□□ -0.63
CHD3-216ENST00000573936 CD86P42081 329 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 TNNT3P45378 269 aaPredicted RBP11.09□□□□□ -0.63
CHD3-216ENST00000573936 GRIA4P48058 902 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 FAM193AP78312 1265 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 SKOR1P84550 965 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 WASHC5Q12768 1159 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 OVGP1Q12889 678 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 TRAF2Q12933 501 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 STAT4Q14765 748 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 TMEM259Q4ZIN3 620 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 ITPRIPL1Q6GPH6 555 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 NAPEPLDQ6IQ20 393 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 IL27RAQ6UWB1 636 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 USP45Q70EL2 814 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 ADAT2Q7Z6V5 191 aaKnown RBP11.09□□□□□ -0.63
CHD3-216ENST00000573936 SLC35F6Q8N357 371 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 ZCCHC9Q8N567 271 aaKnown RBP11.09□□□□□ -0.63
CHD3-216ENST00000573936 C1orf216Q8TAB5 229 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 IMP4Q96G21 291 aaKnown RBP11.09□□□□□ -0.63
CHD3-216ENST00000573936 NSMCE3Q96MG7 304 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 PPP1R2P1Q96PQ5 205 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 LENG8Q96PV6 779 aaPredicted RBP11.09□□□□□ -0.63
CHD3-216ENST00000573936 FCRL5Q96RD9 977 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 C1QTNF2Q9BXJ5 285 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 TDRD1Q9BXT4 1180 aaKnown RBP11.09□□□□□ -0.63
CHD3-216ENST00000573936 ADGRE3Q9BY15 652 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 SLC17A9Q9BYT1 436 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 CEP41Q9BYV8 373 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 EBF2Q9HAK2 575 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 PCDH9Q9HC56 1237 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 TM9SF3Q9HD45 589 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 AASDHPPTQ9NRN7 309 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 HOMER3Q9NSC5 361 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 KCTD5Q9NXV2 234 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 HS3ST3A1Q9Y663 406 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 DMXL2Q8TDJ6 3036 aa11.09□□□□□ -0.63
CHD3-216ENST00000573936 CACNA1EQ15878 2313 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 IGLON5A6NGN9 336 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 PATE3B3GLJ2 98 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 SLC31A1O15431 190 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 KCNN4O15554 427 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 CEP104O60308 925 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 MMP20O60882 483 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 PAK4O96013 591 aaPredicted RBP11.08□□□□□ -0.64
CHD3-216ENST00000573936 MMP2P08253 660 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 CEACAM1P13688 526 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 CD38P28907 300 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 STIP1P31948 543 aaKnown RBP11.08□□□□□ -0.64
CHD3-216ENST00000573936 VIPR1P32241 457 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 MMP12P39900 470 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 ATXN3P54252 364 aaPredicted RBP11.08□□□□□ -0.64
CHD3-216ENST00000573936 C21orf59P57076 290 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 IRX4P78413 519 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 PRPSAP1Q14558 356 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 LONRF2Q1L5Z9 754 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 SEL1L3Q68CR1 1132 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 CCDC70Q6NSX1 233 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 DPPA4Q7L190 304 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 IQCHQ86VS3 1027 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 ZSWIM9Q86XI8 627 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 ZNF567Q8N184 647 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.08□□□□□ -0.64
CHD3-216ENST00000573936 MFSD2AQ8NA29 543 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 KDF1Q8NAX2 398 aaPredicted RBP11.08□□□□□ -0.64
CHD3-216ENST00000573936 DENND6BQ8NEG7 585 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 SLC35B2Q8TB61 432 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 PIH1D2Q8WWB5 315 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 TADA1Q96BN2 335 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 LRRC45Q96CN5 670 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 IFT43Q96FT9 208 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 SCRN2Q96FV2 425 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 SRPK1Q96SB4 655 aaKnown RBP11.08□□□□□ -0.64
CHD3-216ENST00000573936 RBM15Q96T37 977 aaKnown RBP eCLIP11.08□□□□□ -0.64
CHD3-216ENST00000573936 NAP1L3Q99457 506 aaPredicted RBP11.08□□□□□ -0.64
CHD3-216ENST00000573936 ORAI3Q9BRQ5 295 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 CAPN10Q9HC96 672 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 TMEM9BQ9NQ34 198 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 FAM153AQ9UHL3 310 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 RSPH14Q9UHP6 348 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 CHKBQ9Y259 395 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 ITM2BQ9Y287 266 aa11.08□□□□□ -0.64
CHD3-216ENST00000573936 FASNP49327 2511 aaKnown RBP11.07□□□□□ -0.64
CHD3-216ENST00000573936 ASCC3Q8N3C0 2202 aaKnown RBP11.07□□□□□ -0.64
CHD3-216ENST00000573936 TCRBV7S2A1N4TA0A589 114 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 GOLGA6CA6NDK9 693 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 GOLGA6BA6NDN3 693 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 C5orf60A6NFR6 353 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 PSMD11O00231 422 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms