RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 UBXN10Q96LJ8 280 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 PHF12Q96QT6 1004 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 CSNK1G1Q9HCP0 422 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 CDH9Q9ULB4 789 aa19.16■□□□□ 0.66
SCARF1-206ENST00000573852 hCG_2014768A0A024R1R8 64 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 RPL10P27635 214 aaKnown RBP19.15■□□□□ 0.66
SCARF1-206ENST00000573852 PRKCQQ04759 706 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 NHSL2Q5HYW2 709 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 ZBTB49Q6ZSB9 765 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 KIAA0408Q6ZU52 694 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 RETREG3Q86VR2 466 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 DHFR2Q86XF0 187 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 PNPLA3Q9NST1 481 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 HEMK1Q9Y5R4 338 aaPredicted RBP19.15■□□□□ 0.66
SCARF1-206ENST00000573852 PAGE1O75459 146 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 RBP1P09455 135 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 ALDOCP09972 364 aaKnown RBP19.15■□□□□ 0.66
SCARF1-206ENST00000573852 ATP6V1B2P21281 511 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 BDNFP23560 247 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 GRIA3P42263 894 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 LEPRP48357 1165 aaKnown RBP19.15■□□□□ 0.66
SCARF1-206ENST00000573852 EMP3P54852 163 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 CDH15P55291 814 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 WNT3AP56704 352 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 KLC3Q6P597 504 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 TMEM207Q6UWW9 146 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 RIN3Q8TB24 985 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 SH3RF2Q8TEC5 729 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 IRGQQ8WZA9 623 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 MIOSQ9NXC5 875 aa19.15■□□□□ 0.66
SCARF1-206ENST00000573852 IGLV3-25P01717 112 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 CRYBB1P53674 252 aaPredicted RBP19.14■□□□□ 0.65
SCARF1-206ENST00000573852 EIF4EBP2Q13542 120 aaPredicted RBP19.14■□□□□ 0.65
SCARF1-206ENST00000573852 HECTD2Q5U5R9 776 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 HACD2Q6Y1H2 254 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 GPR142Q7Z601 462 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 LDB1Q86U70 411 aaPredicted RBP19.14■□□□□ 0.65
SCARF1-206ENST00000573852 ANKFN1Q8N957 763 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 RMND5BQ96G75 393 aaPredicted RBP19.14■□□□□ 0.65
SCARF1-206ENST00000573852 GAD1Q99259 594 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 RTP3Q9BQQ7 232 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 PAAF1Q9BRP4 392 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 EFHD1Q9BUP0 239 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 ANKRD60Q9BZ19 345 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 PRKD2Q9BZL6 878 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 ALG9Q9H6U8 611 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 PDHXO00330 501 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 IMPDH1P20839 514 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 CDK9P50750 372 aaKnown RBP19.14■□□□□ 0.65
SCARF1-206ENST00000573852 CLCN5P51795 746 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 GALNT1Q10472 559 aaPredicted RBP19.14■□□□□ 0.65
SCARF1-206ENST00000573852 ACAP2Q15057 778 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 PPP4R4Q6NUP7 873 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 FIBCD1Q8N539 461 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 SCAMP5Q8TAC9 235 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 NPLOC4Q8TAT6 608 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 SFMBT1Q9UHJ3 866 aa19.14■□□□□ 0.65
SCARF1-206ENST00000573852 DICER1Q9UPY3 1922 aaKnown RBP19.13■□□□□ 0.65
SCARF1-206ENST00000573852 FAM155AB1AL88 458 aaPredicted RBP19.13■□□□□ 0.65
SCARF1-206ENST00000573852 AKAP10O43572 662 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 SUPT7LO94864 414 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 GPX3P22352 226 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 CDKN2DP55273 166 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 MYBPC3Q14896 1274 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 SLC14A2Q15849 920 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 MANEALQ5VSG8 457 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 OR2T34Q8NGX1 318 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 OR2T3Q8NH03 318 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 CROCCQ5TZA2 2017 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 COL4A4P53420 1690 aaPredicted RBP19.13■□□□□ 0.65
SCARF1-206ENST00000573852 CCL22O00626 93 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 IRAK2O43187 625 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 MSI1O43347 362 aaKnown RBP19.13■□□□□ 0.65
SCARF1-206ENST00000573852 BMP2P12643 396 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 CYP2C18P33260 490 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 PGFP49763 221 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 NME5P56597 212 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 GPR158Q5T848 1215 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 KDELC1Q6UW63 502 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 LPCAT2Q7L5N7 544 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 ERI1Q8IV48 349 aaKnown RBP19.13■□□□□ 0.65
SCARF1-206ENST00000573852 SLC22A9Q8IVM8 553 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 FAM47BQ8NA70 645 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 FCRL2Q96LA5 508 aaPredicted RBP19.13■□□□□ 0.65
SCARF1-206ENST00000573852 IL1RL2Q9HB29 575 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 MPP6Q9NZW5 540 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 VWA7Q9Y334 891 aa19.13■□□□□ 0.65
SCARF1-206ENST00000573852 A0A0J9YVX5 310 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 SAC3D1A6NKF1 404 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 HOXC13P31276 330 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 ACADVLP49748 655 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 UGT3A2Q3SY77 523 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 ZNF678Q5SXM1 525 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 LZTR1Q8N653 840 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 OR13J1Q8NGT2 312 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 TFAP2CQ92754 450 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 LPPQ93052 612 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 C19orf60Q96EN9 201 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 TMLHEQ9NVH6 421 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 ARMC1Q9NVT9 282 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms