RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 SCG3Q8WXD2 468 aaKnown RBP22.12■■□□□ 1.13
SNF8-216ENST00000573795 OR1E3Q8WZA6 343 aa22.12■■□□□ 1.13
SNF8-216ENST00000573795 ECHDC3Q96DC8 303 aa22.12■■□□□ 1.13
SNF8-216ENST00000573795 PCMTD1Q96MG8 357 aaPredicted RBP22.12■■□□□ 1.13
SNF8-216ENST00000573795 GFM1Q96RP9 751 aaKnown RBP22.12■■□□□ 1.13
SNF8-216ENST00000573795 TUBGCP5Q96RT8 1024 aa22.12■■□□□ 1.13
SNF8-216ENST00000573795 PEBP4Q96S96 227 aa22.12■■□□□ 1.13
SNF8-216ENST00000573795 HSD3B7Q9H2F3 369 aa22.12■■□□□ 1.13
SNF8-216ENST00000573795 EPB41L5Q9HCM4 733 aa22.12■■□□□ 1.13
SNF8-216ENST00000573795 FGF22Q9HCT0 170 aa22.12■■□□□ 1.13
SNF8-216ENST00000573795 AP4E1Q9UPM8 1137 aa22.12■■□□□ 1.13
SNF8-216ENST00000573795 DGKBQ9Y6T7 804 aa22.12■■□□□ 1.13
SNF8-216ENST00000573795 BOD1L1Q8NFC6 3051 aa22.12■■□□□ 1.13
SNF8-216ENST00000573795 ANKRD62A6NC57 917 aa22.11■■□□□ 1.13
SNF8-216ENST00000573795 TMEM202A6NGA9 273 aa22.11■■□□□ 1.13
SNF8-216ENST00000573795 CAPN8A6NHC0 703 aa22.11■■□□□ 1.13
SNF8-216ENST00000573795 PLD2O14939 933 aa22.11■■□□□ 1.13
SNF8-216ENST00000573795 EFSO43281 561 aa22.11■■□□□ 1.13
SNF8-216ENST00000573795 UGT1A5P35504 534 aa22.11■■□□□ 1.13
SNF8-216ENST00000573795 CSNK1DP48730 415 aa22.11■■□□□ 1.13
SNF8-216ENST00000573795 ARHGAP36Q6ZRI8 547 aa22.11■■□□□ 1.13
SNF8-216ENST00000573795 SRLQ86TD4 932 aa22.11■■□□□ 1.13
SNF8-216ENST00000573795 PCDHGA7Q9Y5G6 932 aa22.11■■□□□ 1.13
SNF8-216ENST00000573795 ARHGEF17Q96PE2 2063 aaPredicted RBP22.1■■□□□ 1.13
SNF8-216ENST00000573795 CFAP69A5D8W1 941 aa22.1■■□□□ 1.13
SNF8-216ENST00000573795 RECQL5O94762 991 aaPredicted RBP22.1■■□□□ 1.13
SNF8-216ENST00000573795 HGFP14210 728 aa22.1■■□□□ 1.13
SNF8-216ENST00000573795 CCKBRP32239 447 aa22.1■■□□□ 1.13
SNF8-216ENST00000573795 KIAA1024LP59773 190 aa22.1■■□□□ 1.13
SNF8-216ENST00000573795 UBXN1Q04323 297 aa22.1■■□□□ 1.13
SNF8-216ENST00000573795 DCUN1D2Q6PH85 259 aa22.1■■□□□ 1.13
SNF8-216ENST00000573795 CLEC17AQ6ZS10 378 aa22.1■■□□□ 1.13
SNF8-216ENST00000573795 CYP4V2Q6ZWL3 525 aaPredicted RBP22.1■■□□□ 1.13
SNF8-216ENST00000573795 RAB11FIP2Q7L804 512 aa22.1■■□□□ 1.13
SNF8-216ENST00000573795 PELI3Q8N2H9 469 aa22.1■■□□□ 1.13
SNF8-216ENST00000573795 FBXO39Q8N4B4 442 aa22.1■■□□□ 1.13
SNF8-216ENST00000573795 NPWQ8N729 165 aa22.1■■□□□ 1.13
SNF8-216ENST00000573795 KCTD15Q96SI1 283 aaPredicted RBP22.1■■□□□ 1.13
SNF8-216ENST00000573795 LRRN3Q9H3W5 708 aa22.1■■□□□ 1.13
SNF8-216ENST00000573795 MRPL40Q9NQ50 206 aaKnown RBP22.1■■□□□ 1.13
SNF8-216ENST00000573795 LRRC10BA6NIK2 292 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 EEF2KO00418 725 aaKnown RBP22.09■■□□□ 1.13
SNF8-216ENST00000573795 NOBOXO60393 691 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 TNFP01375 233 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 SLC5A2P31639 672 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 INHBCP55103 352 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 EIF3IQ13347 325 aaKnown RBP22.09■■□□□ 1.13
SNF8-216ENST00000573795 MAMLD1Q13495 774 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 ZSCAN23Q3MJ62 389 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 CFAP58Q5T655 872 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 OGFOD3Q6PK18 319 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 LIPIQ6XZB0 460 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 CCDC81Q6ZN84 652 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 IRF2BP2Q7Z5L9 587 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 ATL2Q8NHH9 583 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 SNRNP25Q9BV90 132 aaKnown RBP22.09■■□□□ 1.13
SNF8-216ENST00000573795 DHX35Q9H5Z1 703 aaKnown RBP22.09■■□□□ 1.13
SNF8-216ENST00000573795 ATP13A3Q9H7F0 1226 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 APPL1Q9UKG1 709 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 ACSL6Q9UKU0 697 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 ATXN7L1Q9ULK2 861 aaPredicted RBP22.09■■□□□ 1.13
SNF8-216ENST00000573795 MYO18BQ8IUG5 2567 aa22.09■■□□□ 1.13
SNF8-216ENST00000573795 ARHGAP42A6NI28 874 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 J3QKU1 62 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 TRAFD1O14545 582 aaPredicted RBP22.08■■□□□ 1.13
SNF8-216ENST00000573795 ATMINO43313 823 aaPredicted RBP22.08■■□□□ 1.13
SNF8-216ENST00000573795 SERPINA4P29622 427 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 MYL5Q02045 173 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 SRSF6Q13247 344 aaKnown RBP22.08■■□□□ 1.13
SNF8-216ENST00000573795 NCAPHQ15003 741 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 CERCAMQ5T4B2 595 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 PLEKHA7Q6IQ23 1121 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 DPPA4Q7L190 304 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 CCNJLQ8IV13 435 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 TP53INP2Q8IXH6 220 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 OR6C4Q8NGE1 309 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 OR56A4Q8NGH8 313 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 CCNL2Q96S94 520 aaPredicted RBP22.08■■□□□ 1.13
SNF8-216ENST00000573795 LGR4Q9BXB1 951 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 TRIM7Q9C029 511 aa22.08■■□□□ 1.13
SNF8-216ENST00000573795 PALMO75781 387 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 KRT10P13645 584 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 FERP16591 822 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 ERCC2P18074 760 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 PSMA2P25787 234 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 TRIM23P36406 574 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 ZFP36L1Q07352 338 aaKnown RBP22.07■■□□□ 1.12
SNF8-216ENST00000573795 TGIF1Q15583 401 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 RFX8Q6ZV50 586 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 TMPRSS9Q7Z410 1059 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 CCL4L1Q8NHW4 92 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 MED8Q96G25 268 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 TMEM168Q9H0V1 697 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 DONSONQ9NYP3 566 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 PCSK1NQ9UHG2 260 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 RNF215Q9Y6U7 377 aa22.07■■□□□ 1.12
SNF8-216ENST00000573795 EIF3CLB5ME19 914 aaKnown RBP22.06■■□□□ 1.12
SNF8-216ENST00000573795 B8ZZF3 427 aa22.06■■□□□ 1.12
SNF8-216ENST00000573795 TMX2-CTNND1H3BSU7 103 aa22.06■■□□□ 1.12
SNF8-216ENST00000573795 CACNB4O00305 520 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms