RNA–Protein interactions for RNA: ENST00000571714.5

NPLOC4-206, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-206ENST00000571714 TBR1Q16650 682 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 DPCR1Q3MIW9 517 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 C14orf28Q4W4Y0 310 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 XKR5Q6UX68 686 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 SLFN11Q7Z7L1 901 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 ZNF677Q86XU0 584 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 DNAAF5Q86Y56 855 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 UMODL1-AS1Q8N2C9 162 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 PELI3Q8N2H9 469 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 HCAR2Q8TDS4 363 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 USP7Q93009 1102 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 PMEPA1Q969W9 287 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 PCDHB18PQ96TA0 734 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 SEMA3CQ99985 751 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 NCAPGQ9BPX3 1015 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 ARHGAP9Q9BRR9 750 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 TMEM168Q9H0V1 697 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 SEMA6CQ9H3T2 930 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 SUV39H2Q9H5I1 410 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 DAAM1Q9Y4D1 1078 aa11.2□□□□□ -0.62
NPLOC4-206ENST00000571714 RELNP78509 3460 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 TCRBV5S1A1TA0A578 114 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 WASH4PA8MWX3 477 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 B4DGG1 531 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 J3KR12 359 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 EPHB6O15197 1021 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 CCP110O43303 1012 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 TNFP01375 233 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 KRT3P12035 628 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 GPD1P21695 349 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 MAPK10P53779 464 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 JAM2P57087 298 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 YBEYP58557 167 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 B4GALNT1Q00973 533 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 TPD52L1Q16890 204 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 PARP15Q460N3 678 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 MANEAQ5SRI9 462 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 SPECC1LQ69YQ0 1117 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 ERAP2Q6P179 960 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 BRAT1Q6PJG6 821 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 WDR59Q6PJI9 974 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 ATG14Q6ZNE5 492 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 TAF8Q7Z7C8 310 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 CAMK1DQ8IU85 385 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 FAM114A1Q8IWE2 563 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 FAM46DQ8NEK8 389 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 OR56A4Q8NGH8 313 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 TMEM159Q96B96 161 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 NSMCE3Q96MG7 304 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 CMKLR1Q99788 373 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 LGR4Q9BXB1 951 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 LRRC19Q9H756 370 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 RDH14Q9HBH5 336 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 SAMSN1Q9NSI8 373 aaKnown RBP11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 LRIT1Q9P2V4 623 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 ATP8A1Q9Y2Q0 1164 aa11.19□□□□□ -0.62
NPLOC4-206ENST00000571714 A0A1W2PQC6 194 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 B4GAT1O43505 415 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 NUDT21O43809 227 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 CREB3O43889 395 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 RECQL5O94762 991 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 CCL4P13236 92 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 MAZP56270 477 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 EFHC2Q5JST6 749 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 COLEC12Q5KU26 742 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 PHF19Q5T6S3 580 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 ZNF574Q6ZN55 896 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 C17orf82Q86X59 251 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 ATL2Q8NHH9 583 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 PTCD2Q8WV60 388 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 ECHDC3Q96DC8 303 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 ZNF641Q96N77 438 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 NUDT22Q9BRQ3 303 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 SEPT10Q9P0V9 454 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 UBA2Q9UBT2 640 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 FZD10Q9ULW2 581 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 ST14Q9Y5Y6 855 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 NAV2Q8IVL1 2488 aa11.18□□□□□ -0.62
NPLOC4-206ENST00000571714 CFAP69A5D8W1 941 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 CACNB4O00305 520 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 PES1O00541 588 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 PRAMEF11O60813 436 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 FUCA1P04066 466 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 HOXC4P09017 264 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 ERCC5P28715 1186 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 SOX5P35711 763 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 TRIM23P36406 574 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 BECN1Q14457 450 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 GRM3Q14832 879 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 NR1D2Q14995 579 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 MAP9Q49MG5 647 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 TCP11X2Q5H9J9 407 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 PPP1R15BQ5SWA1 713 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 AFMIDQ63HM1 303 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 LIPIQ6XZB0 460 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 DPPA4Q7L190 304 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 MON1BQ7L1V2 547 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 ZNF438Q7Z4V0 828 aa11.17□□□□□ -0.62
NPLOC4-206ENST00000571714 NRROSQ86YC3 692 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms