RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 DTLQ9NZJ0 730 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 B4GALT6Q9UBX8 382 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 PNMA8BQ9ULN7 279 aaPredicted RBP14.63□□□□□ -0.07
LITAF-208ENST00000571627 REXO2Q9Y3B8 237 aaKnown RBP14.63□□□□□ -0.07
LITAF-208ENST00000571627 TTLL3Q9Y4R7 772 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 HEY1Q9Y5J3 304 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 KMT2BQ9UMN6 2715 aaPredicted RBP14.63□□□□□ -0.07
LITAF-208ENST00000571627 RCCD1A6NED2 376 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 MATN3O15232 486 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 HTRA2O43464 458 aaPredicted RBP14.62□□□□□ -0.07
LITAF-208ENST00000571627 SIGLEC6O43699 453 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 SOCS5O75159 536 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 NEBLO76041 1014 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 CPP00450 1065 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 PCCBP05166 539 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 ELFN1P0C7U0 828 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 NME1P15531 152 aaKnown RBP14.62□□□□□ -0.07
LITAF-208ENST00000571627 ZFXP17010 805 aaPredicted RBP14.62□□□□□ -0.07
LITAF-208ENST00000571627 NAP1L1P55209 391 aaKnown RBP14.62□□□□□ -0.07
LITAF-208ENST00000571627 CLDN6P56747 220 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 POLR2LP62875 67 aaKnown RBP14.62□□□□□ -0.07
LITAF-208ENST00000571627 DYNLT1P63172 113 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 DSC2Q02487 901 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 KIF5AQ12840 1032 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 EIF2B5Q13144 721 aaKnown RBP14.62□□□□□ -0.07
LITAF-208ENST00000571627 IHHQ14623 411 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 TIGD7Q6NT04 549 aaPredicted RBP14.62□□□□□ -0.07
LITAF-208ENST00000571627 DHRS13Q6UX07 377 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 NPNTQ6UXI9 565 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 UNQ6494/PRO21346Q6UXR6 183 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 LIPIQ6XZB0 460 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 NYAP1Q6ZVC0 841 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 DPPA4Q7L190 304 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 DAAM2Q86T65 1068 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 WDFY3Q8IZQ1 3526 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 RBFAQ8N0V3 343 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 CCNYQ8ND76 341 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 ZNF548Q8NEK5 533 aaPredicted RBP14.62□□□□□ -0.07
LITAF-208ENST00000571627 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.62□□□□□ -0.07
LITAF-208ENST00000571627 MAML1Q92585 1016 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 GATA6Q92908 595 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 IFT43Q96FT9 208 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 TSGA13Q96PP4 275 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 LGMNQ99538 433 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 TMEM121BQ9BXQ6 578 aaPredicted RBP14.62□□□□□ -0.07
LITAF-208ENST00000571627 TCEAL2Q9H3H9 227 aaPredicted RBP14.62□□□□□ -0.07
LITAF-208ENST00000571627 GRPEL1Q9HAV7 217 aa14.62□□□□□ -0.07
LITAF-208ENST00000571627 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.62□□□□□ -0.07
LITAF-208ENST00000571627 MYLKQ15746 1914 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 A0A0U1RQS6 177 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 KCNK1O00180 336 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 APOL1O14791 398 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 RECQL5O94762 991 aaPredicted RBP14.61□□□□□ -0.07
LITAF-208ENST00000571627 CSF2P04141 144 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 HLA-DQB2P05538 268 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 GIMD1P0DJR0 217 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 CCNB1P14635 433 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 JUNDP17535 347 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 GM2AP17900 193 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 MX2P20592 715 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 CCNCP24863 283 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 ACADVLP49748 655 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 HNRNPKP61978 463 aaKnown RBP eCLIP14.61□□□□□ -0.076e-8■□□□□ 11.1
LITAF-208ENST00000571627 INPP5AQ14642 412 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 LLGL1Q15334 1064 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 PROX2Q3B8N5 592 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 MFSD7Q6UXD7 560 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 B4GALNT4Q76KP1 1039 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 RFX6Q8HWS3 928 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 PLA2G15Q8NCC3 412 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 HDAC11Q96DB2 347 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 ZNF830Q96NB3 372 aaPredicted RBP14.61□□□□□ -0.07
LITAF-208ENST00000571627 SMIM14Q96QK8 99 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 POLR1EQ9GZS1 481 aaKnown RBP14.61□□□□□ -0.07
LITAF-208ENST00000571627 LACRTQ9GZZ8 138 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 RBM22Q9NW64 420 aaKnown RBP eCLIP14.61□□□□□ -0.07
LITAF-208ENST00000571627 SALL4Q9UJQ4 1053 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 MSRB2Q9Y3D2 182 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 OR1A2Q9Y585 309 aa14.61□□□□□ -0.07
LITAF-208ENST00000571627 CACNA1BQ00975 2339 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 FAM149AA5PLN7 773 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 NPIPB15A6NHN6 443 aaPredicted RBP14.6□□□□□ -0.07
LITAF-208ENST00000571627 H3BM21 787 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 ARHGAP6O43182 974 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 NRDCO43847 1150 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 PGLSO95336 258 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 PDHA1P08559 390 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 MYF5P13349 255 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 CTPS1P17812 591 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 MARCKSL1P49006 195 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 YPEL5P62699 121 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 PTK2BQ14289 1009 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 ACOX1Q15067 660 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 TCEA2Q15560 299 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 CNGA3Q16281 694 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 RALGPS1Q5JS13 557 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 ARMC12Q5T9G4 340 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 DENND2CQ68D51 928 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 SLC9A4Q6AI14 798 aa14.6□□□□□ -0.07
LITAF-208ENST00000571627 MACC1Q6ZN28 852 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms