RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 VAC14Q08AM6 782 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 SLC10A7Q0GE19 358 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 ZNF235Q14590 738 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 LBRQ14739 615 aaKnown RBP13.45□□□□□ -0.26
CCDC40-205ENST00000571028 TAZQ16635 292 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 CARD16Q5EG05 197 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 TMCO4Q5TGY1 634 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 DPY19L3Q6ZPD9 716 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 BBS12Q6ZW61 710 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 PCDH20Q8N6Y1 951 aaKnown RBP13.45□□□□□ -0.26
CCDC40-205ENST00000571028 PAF1Q8N7H5 531 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 OR2A12Q8NGT7 310 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 OR2T34Q8NGX1 318 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 CCDC114Q96M63 670 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 FAM129BQ96TA1 746 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 TLR10Q9BXR5 811 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 FAM117AQ9C073 453 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 CEP44Q9C0F1 390 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 C10orf88Q9H8K7 445 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 HECAQ9UBI9 543 aaPredicted RBP13.45□□□□□ -0.26
CCDC40-205ENST00000571028 TTLL3Q9Y4R7 772 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 KCNK1O00180 336 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 TLR4O00206 839 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 PPP1R12AO14974 1030 aaPredicted RBP13.44□□□□□ -0.26
CCDC40-205ENST00000571028 CEP104O60308 925 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 TJP3O95049 919 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 ATP1A1P05023 1023 aaKnown RBP13.44□□□□□ -0.26
CCDC40-205ENST00000571028 ACP1P24666 158 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 MSNP26038 577 aaKnown RBP13.44□□□□□ -0.26
CCDC40-205ENST00000571028 CHRNA3P32297 505 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 SLC8A1P32418 973 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 CCNHP51946 323 aaPredicted RBP13.44□□□□□ -0.26
CCDC40-205ENST00000571028 METAP1P53582 386 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 NXPH1P58417 271 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 MAXP61244 160 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 SNRPD1P62314 119 aaKnown RBP13.44□□□□□ -0.26
CCDC40-205ENST00000571028 BNIP3Q12983 259 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 ELAVL3Q14576 367 aaKnown RBP13.44□□□□□ -0.26
CCDC40-205ENST00000571028 PDK1Q15118 436 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 ARSIQ5FYB1 569 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 MARC1Q5VT66 337 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 TIGD7Q6NT04 549 aaPredicted RBP13.44□□□□□ -0.26
CCDC40-205ENST00000571028 LURAP1LQ8IV03 231 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 CCDC13Q8IYE1 715 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 TSEN2Q8NCE0 465 aaKnown RBP13.44□□□□□ -0.26
CCDC40-205ENST00000571028 OR2AP1Q8NGE2 309 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 CASKIN2Q8WXE0 1202 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 HIC2Q96JB3 615 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 GDAP1L1Q96MZ0 367 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 DEPDC7Q96QD5 511 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 CEP41Q9BYV8 373 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 DPH1Q9BZG8 443 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 RSPH9Q9H1X1 276 aaPredicted RBP13.44□□□□□ -0.26
CCDC40-205ENST00000571028 ERVMER34-1Q9H9K5 563 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 NT5MQ9NPB1 228 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 THSD1Q9NS62 852 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 LHX3Q9UBR4 397 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 SEPT3Q9UH03 358 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 TPX2Q9ULW0 747 aaKnown RBP13.44□□□□□ -0.26
CCDC40-205ENST00000571028 PCDHB1Q9Y5F3 818 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 ATMQ13315 3056 aa13.44□□□□□ -0.26
CCDC40-205ENST00000571028 CABIN1Q9Y6J0 2220 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 A0A1W2PP55 124 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 TCRBV7S2A1N4TA0A589 114 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 KPNA3O00505 521 aaPredicted RBP13.43□□□□□ -0.26
CCDC40-205ENST00000571028 MCF2LO15068 1137 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 MID1O15344 667 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 INSIG1O15503 277 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 MAGEC1O60732 1142 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 ZNF821O75541 412 aaPredicted RBP13.43□□□□□ -0.26
CCDC40-205ENST00000571028 IGSF6O95976 241 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 JCHAINP01591 159 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 CTSLP07711 333 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 C7P10643 843 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 CCNCP24863 283 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 MMP13P45452 471 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 RGRP47804 291 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
CCDC40-205ENST00000571028 SCNN1BP51168 640 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 CCR5P51681 352 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 ERVPABLB-1P60509 514 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 OTUD4Q01804 1114 aaKnown RBP13.43□□□□□ -0.26
CCDC40-205ENST00000571028 CST6Q15828 149 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 MYLK3Q32MK0 819 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 INO80DQ53TQ3 878 aaPredicted RBP13.43□□□□□ -0.26
CCDC40-205ENST00000571028 BZW1Q7L1Q6 419 aaKnown RBP13.43□□□□□ -0.26
CCDC40-205ENST00000571028 DSG4Q86SJ6 1040 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 LRRC49Q8IUZ0 686 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 BBS5Q8N3I7 341 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 ACTL9Q8TC94 416 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 TFB1MQ8WVM0 346 aaKnown RBP13.43□□□□□ -0.26
CCDC40-205ENST00000571028 HEPHQ9BQS7 1158 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 NEUROG2Q9H2A3 272 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 RBM22Q9NW64 420 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC40-205ENST00000571028 IL36AQ9UHA7 158 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 SARDHQ9UL12 918 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 FZD4Q9ULV1 537 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 JRKLQ9Y4A0 524 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 MGAQ8IWI9 3026 aa13.43□□□□□ -0.26
CCDC40-205ENST00000571028 CKAP5Q14008 2032 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms