RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 NUGGCQ68CJ6 796 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 TATDN1Q6P1N9 297 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 LVRNQ6Q4G3 990 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 KIAA1324Q6UXG2 1013 aaKnown RBP4.35□□□□□ -1.71
NUP88-202ENST00000570937 B4GALNT4Q76KP1 1039 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 ANKS1BQ7Z6G8 1248 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 ANKRD23Q86SG2 305 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 TMEM200AQ86VY9 491 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 PTGR2Q8N8N7 351 aaPredicted RBP4.35□□□□□ -1.71
NUP88-202ENST00000570937 FAM110DQ8TAY7 271 aaPredicted RBP4.35□□□□□ -1.71
NUP88-202ENST00000570937 RILPL2Q969X0 211 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 ERO1AQ96HE7 468 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 TRAPPC9Q96Q05 1148 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 PARK7Q99497 189 aaKnown RBP4.35□□□□□ -1.71
NUP88-202ENST00000570937 FRMD8Q9BZ67 464 aaPredicted RBP4.35□□□□□ -1.71
NUP88-202ENST00000570937 MAGEH1Q9H213 219 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 SH2D4AQ9H788 454 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 MAP6D1Q9H9H5 199 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 FBXO4Q9UKT5 387 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 RCE1Q9Y256 329 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 SLC45A1Q9Y2W3 748 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 RFX7Q2KHR2 1363 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 MPHOSPH10O00566 681 aaKnown RBP4.34□□□□□ -1.71
NUP88-202ENST00000570937 GPAA1O43292 621 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 HOXD10P28358 340 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 PGGT1BP53609 377 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 IRX6P78412 446 aaPredicted RBP4.34□□□□□ -1.71
NUP88-202ENST00000570937 SP3Q02447 781 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 ZBTB16Q05516 673 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 CDK18Q07002 472 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 TUBB8Q3ZCM7 444 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 MCMDC2Q4G0Z9 681 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 C12orf60Q5U649 245 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 SLC30A9Q6PML9 568 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 TMEM179Q6ZVK1 233 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 CTU1Q7Z7A3 348 aaKnown RBP4.34□□□□□ -1.71
NUP88-202ENST00000570937 GPSM1Q86YR5 675 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 ZNF444Q8N0Y2 327 aaPredicted RBP4.34□□□□□ -1.71
NUP88-202ENST00000570937 TMEM199Q8N511 208 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 ENAHQ8N8S7 591 aaPredicted RBP4.34□□□□□ -1.71
NUP88-202ENST00000570937 VPS37AQ8NEZ2 397 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 SDR42E1Q8WUS8 393 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 RUFY2Q8WXA3 655 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 LPAR1Q92633 364 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 ARRDC3Q96B67 414 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 C3orf49Q96BT1 292 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 MARK4Q96L34 752 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.34□□□□□ -1.71
NUP88-202ENST00000570937 NAPBQ9H115 298 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 PNRC2Q9NPJ4 139 aaKnown RBP4.34□□□□□ -1.71
NUP88-202ENST00000570937 DIAPH3Q9NSV4 1193 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 ARL15Q9NXU5 204 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 GRHPRQ9UBQ7 328 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 BAG5Q9UL15 447 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 AK9Q5TCS8 1911 aa4.34□□□□□ -1.71
NUP88-202ENST00000570937 AKAP11Q9UKA4 1901 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 MAST2Q6P0Q8 1798 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 THSD7BQ9C0I4 1608 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 TRBV5-7A0A0A0MS05 114 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 NPIPB13A6NJU9 1138 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 NPIPB5A8MRT5 1133 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 KRTAP29-1A8MX34 341 aaPredicted RBP4.33□□□□□ -1.72
NUP88-202ENST00000570937 NPIPB4C9JG80 1138 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 H0Y3Z8 333 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 PRKAB2O43741 272 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 GH2P01242 217 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 HLA-DQA2P01906 255 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 ALPLP05186 524 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 PCP11498 1178 aaKnown RBP4.33□□□□□ -1.72
NUP88-202ENST00000570937 PKMP14618 531 aaKnown RBP4.33□□□□□ -1.72
NUP88-202ENST00000570937 SHMT1P34896 483 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 SLC16A2P36021 539 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 MCM2P49736 904 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 NT5C2P49902 561 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 RASSF2P50749 326 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 PRMT2P55345 433 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 P2RX3P56373 397 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 BACE1P56817 501 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 IRX3P78415 501 aaPredicted RBP4.33□□□□□ -1.72
NUP88-202ENST00000570937 SMAD1Q15797 465 aaKnown RBP4.33□□□□□ -1.72
NUP88-202ENST00000570937 SLC4A8Q2Y0W8 1093 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 ODF3L2Q3SX64 289 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 SBK1Q52WX2 424 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 ALG10Q5BKT4 473 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 ARL13AQ5H913 290 aaPredicted RBP4.33□□□□□ -1.72
NUP88-202ENST00000570937 ALG10BQ5I7T1 473 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 ENTPD8Q5MY95 495 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 Q5PR19 223 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 MTFR2Q6P444 385 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 ZNF549Q6P9A3 640 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 CTR9Q6PD62 1173 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 AAGABQ6PD74 315 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 CENPQQ7L2Z9 268 aaPredicted RBP4.33□□□□□ -1.72
NUP88-202ENST00000570937 RASGRP2Q7LDG7 609 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 IGFN1Q86VF2 1251 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 SLC25A41Q8N5S1 370 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 OR6Y1Q8NGX8 325 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 INPP5DQ92835 1189 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 SDCCAG3Q96C92 435 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 LYZL4Q96KX0 146 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms