RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 PHACTR1Q9C0D0 580 aa6.63□□□□□ -1.35
CTDNEP1-204ENST00000570484 IL22Q9GZX6 179 aa6.63□□□□□ -1.35
CTDNEP1-204ENST00000570484 MTG2Q9H4K7 406 aa6.63□□□□□ -1.35
CTDNEP1-204ENST00000570484 LMAN1LQ9HAT1 526 aa6.63□□□□□ -1.35
CTDNEP1-204ENST00000570484 PRSS16Q9NQE7 514 aa6.63□□□□□ -1.35
CTDNEP1-204ENST00000570484 GRHL1Q9NZI5 618 aa6.63□□□□□ -1.35
CTDNEP1-204ENST00000570484 MMP17Q9ULZ9 603 aa6.63□□□□□ -1.35
CTDNEP1-204ENST00000570484 DOLKQ9UPQ8 538 aa6.63□□□□□ -1.35
CTDNEP1-204ENST00000570484 CHKBQ9Y259 395 aa6.63□□□□□ -1.35
CTDNEP1-204ENST00000570484 MAD1L1Q9Y6D9 718 aa6.63□□□□□ -1.35
CTDNEP1-204ENST00000570484 WASF2Q9Y6W5 498 aa6.63□□□□□ -1.35
CTDNEP1-204ENST00000570484 TICRRQ7Z2Z1 1910 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 HEATR9A2RTY3 570 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 CAPN8A6NHC0 703 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 UPK3BL1B0FP48 263 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 UPK3BL2E5RIL1 263 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 EIF3HO15372 352 aaKnown RBP eCLIP6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 PPFIA2O75334 1257 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 ZNF821O75541 412 aaPredicted RBP6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 RNASEH2AO75792 299 aaKnown RBP6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 DKK1O94907 266 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 CRTAMO95727 393 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 AGTP01019 485 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 EPOP01588 193 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 MMP2P08253 660 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 TIMP2P16035 220 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 PGAM1P18669 254 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 PAMP19021 973 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 C5AR1P21730 350 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 ITGB7P26010 798 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 GKP32189 559 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 CARSP49589 748 aaKnown RBP6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 DGKEP52429 567 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 PDE1BQ01064 536 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 ELP6Q0PNE2 266 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 PDIA2Q13087 525 aaKnown RBP6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 MTM1Q13496 603 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 CAMK2GQ13555 558 aaPredicted RBP6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 ENPP2Q13822 863 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 ARHGEF7Q14155 803 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 POU6F1Q14863 301 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 SLMAPQ14BN4 828 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 CST6Q15828 149 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 ZNF805Q5CZA5 627 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 SIRPB2Q5JXA9 342 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 C9orf64Q5T6V5 341 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 KCTD11Q693B1 232 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 LRRC8BQ6P9F7 803 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 EMBQ6PCB8 327 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 FBXL19Q6PCT2 694 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 GLT6D1Q7Z4J2 308 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 ZBED8Q8IZ13 594 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 PGBD3Q8N328 593 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 KDF1Q8NAX2 398 aaPredicted RBP6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 TMIEQ8NEW7 156 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 GABPB2Q8TAK5 448 aaPredicted RBP6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 HMGB4Q8WW32 186 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 HPS1Q92902 700 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 PBXIP1Q96AQ6 731 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 LRRC39Q96DD0 335 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 SIPA1Q96FS4 1042 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 TTC25Q96NG3 672 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 OMDQ99983 421 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 GORASP1Q9BQQ3 440 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 NAT9Q9BTE0 207 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 PARD6BQ9BYG5 372 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 OSBPL6Q9BZF3 934 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 GPR63Q9BZJ6 419 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 RSPH9Q9H1X1 276 aaPredicted RBP6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 EPC1Q9H2F5 836 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 SUV39H2Q9H5I1 410 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 SAYSD1Q9NPB0 183 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 PIH1D1Q9NWS0 290 aaKnown RBP6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 HACD3Q9P035 362 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 PHTF1Q9UMS5 762 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 SCML1Q9UN30 329 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 NCKAP1Q9Y2A7 1128 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 SIT1Q9Y3P8 196 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 PKP3Q9Y446 797 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 PCDHB11Q9Y5F2 797 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 PCDHGA11Q9Y5H2 935 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 XIRP2A4UGR9 3374 aa6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 NYNRINQ9P2P1 1898 aaKnown RBP6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 MUC22E2RYF6 1773 aaPredicted RBP6.62□□□□□ -1.35
CTDNEP1-204ENST00000570484 C1orf232A0A0U1RR37 186 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 TCRBV7S3A2A0A539 114 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 TSPAN11A1L157 253 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CCDC151A5D8V7 595 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 SDR42E2A6NKP2 422 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 C2orf81A6NN90 581 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 C16orf96A6NNT2 1141 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CHURC1-FNTBB4DL54 471 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CTIFO43310 598 aaKnown RBP6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 HTRA2O43464 458 aaPredicted RBP6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 GFRA3O60609 400 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ADAM23O75077 832 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 POLBP06746 335 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CTSLP07711 333 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ATXN1LP0C7T5 689 aaKnown RBP6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ELFN1P0C7U0 828 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms