RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 PGAP3Q96FM1 320 aaPredicted RBP3.34□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF512Q96ME7 567 aaPredicted RBP3.34□□□□□ -1.87
CNOT1-221ENST00000569924 TGS1Q96RS0 853 aaKnown RBP3.34□□□□□ -1.87
CNOT1-221ENST00000569924 CLSTN3Q9BQT9 956 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 CPPED1Q9BRF8 314 aaPredicted RBP3.34□□□□□ -1.87
CNOT1-221ENST00000569924 C17orf80Q9BSJ5 609 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 HGH1Q9BTY7 390 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 VN1R3Q9BXE9 311 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 REXO4Q9GZR2 422 aaKnown RBP3.34□□□□□ -1.87
CNOT1-221ENST00000569924 CLPBQ9H078 707 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 TMEM168Q9H0V1 697 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 UBE2ZQ9H832 354 aaPredicted RBP3.34□□□□□ -1.87
CNOT1-221ENST00000569924 PDE11AQ9HCR9 933 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 TRIM36Q9NQ86 728 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 GIMAP4Q9NUV9 329 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 C5AR2Q9P296 337 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 MARCH4Q9P2E8 410 aaPredicted RBP3.34□□□□□ -1.87
CNOT1-221ENST00000569924 NKX1-2Q9UD57 310 aaPredicted RBP3.34□□□□□ -1.87
CNOT1-221ENST00000569924 MBD1Q9UIS9 605 aaPredicted RBP3.34□□□□□ -1.87
CNOT1-221ENST00000569924 SORCS3Q9UPU3 1222 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 SSX2IPQ9Y2D8 614 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 NR2E1Q9Y466 385 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 SIP14410 1827 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 ABCB11O95342 1321 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 EMSYQ7Z589 1322 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 SALL3Q9BXA9 1300 aa3.34□□□□□ -1.87
CNOT1-221ENST00000569924 KIAA1217Q5T5P2 1943 aa3.34□□□□□ -1.88
CNOT1-221ENST00000569924 COL4A6Q14031 1691 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 MICAL3Q7RTP6 2002 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 A0A1W2PRX2 142 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 ZAR1LA6NP61 321 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 MUSKO15146 869 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 GOSR1O95249 250 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 ATP5BP06576 529 aaKnown RBP3.33□□□□□ -1.88
CNOT1-221ENST00000569924 GLI1P08151 1106 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 C1SP09871 688 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 FAM200BP0CF97 657 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 HSPD1P10809 573 aaKnown RBP3.33□□□□□ -1.88
CNOT1-221ENST00000569924 SELLP14151 372 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 KCNA2P16389 499 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 STMN1P16949 149 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 SPINK2P20155 84 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 MMP8P22894 467 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 GLDCP23378 1020 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 MCM3P25205 808 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 HNF1BP35680 557 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 CPOXP36551 454 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 PBX3P40426 434 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 MVDP53602 400 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 CDH8P55286 799 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 RRP1P56182 461 aaKnown RBP3.33□□□□□ -1.88
CNOT1-221ENST00000569924 FOXL2P58012 376 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 OLR1P78380 273 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 DEFB103AP81534 67 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 GHRHRQ02643 423 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 STXBP2Q15833 593 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 LY6KQ17RY6 165 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 RNF151Q2KHN1 245 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 TCTN1Q2MV58 587 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 MCMDC2Q4G0Z9 681 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 RUNDC3AQ59EK9 446 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 UBAP2Q5T6F2 1119 aaKnown RBP3.33□□□□□ -1.88
CNOT1-221ENST00000569924 ERMARDQ5T6L9 678 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 ADALQ6DHV7 355 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 KCNV1Q6PIU1 500 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 FAM111BQ6SJ93 734 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 RRM2BQ7LG56 351 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 CCDC91Q7Z6B0 441 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 GPR149Q86SP6 731 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 SERINC5Q86VE9 423 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 EPHX4Q8IUS5 362 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 UNC45BQ8IWX7 931 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 TP53INP2Q8IXH6 220 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 IZUMO1Q8IYV9 350 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 SYT2Q8N9I0 419 aaPredicted RBP3.33□□□□□ -1.88
CNOT1-221ENST00000569924 POC5Q8NA72 575 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 TMEM116Q8NCL8 245 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.33□□□□□ -1.88
CNOT1-221ENST00000569924 GSDMBQ8TAX9 411 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 GDAP1Q8TB36 358 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 NEK9Q8TD19 979 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 PRPF31Q8WWY3 499 aaKnown RBP3.33□□□□□ -1.88
CNOT1-221ENST00000569924 ESR2Q92731 530 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 KLHL29Q96CT2 875 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 TBC1D31Q96DN5 1066 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 MRPL38Q96DV4 380 aaKnown RBP3.33□□□□□ -1.88
CNOT1-221ENST00000569924 GCNAQ96QF7 691 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 TAAR1Q96RJ0 339 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 MAP7D2Q96T17 732 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 SPATA25Q9BR10 227 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.33□□□□□ -1.88
CNOT1-221ENST00000569924 CTDSP1Q9GZU7 261 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 RNF41Q9H4P4 317 aaPredicted RBP3.33□□□□□ -1.88
CNOT1-221ENST00000569924 AGO3Q9H9G7 860 aaKnown RBP3.33□□□□□ -1.88
CNOT1-221ENST00000569924 CD320Q9NPF0 282 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 ARHGEF3Q9NR81 526 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 SPATS2LQ9NUQ6 558 aaKnown RBP3.33□□□□□ -1.88
CNOT1-221ENST00000569924 THAP1Q9NVV9 213 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 HSFX1Q9UBD0 423 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 HDAC6Q9UBN7 1215 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms