RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 IHHQ14623 411 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 DPYSL2Q16555 572 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 C3orf38Q5JPI3 329 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 BRAT1Q6PJG6 821 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 LIPIQ6XZB0 460 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 POLNQ7Z5Q5 900 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 B3GNT8Q7Z7M8 397 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 PTCD2Q8WV60 388 aaKnown RBP13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 BTN2A2Q8WVV5 523 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 SMIM14Q96QK8 99 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 PSKH2Q96QS6 385 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 EIF3CQ99613 913 aaKnown RBP13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 CCDC3Q9BQI4 270 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 LGR4Q9BXB1 951 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 SLC13A1Q9BZW2 595 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 POLR1BQ9H9Y6 1135 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 SP110Q9HB58 689 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 MRPL40Q9NQ50 206 aaKnown RBP13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 SIRPGQ9P1W8 387 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 SATB2Q9UPW6 733 aa13.92□□□□□ -0.18
GTF3C1-211ENST00000569653 TENM4Q6N022 2769 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 A0A0U1RQS6 177 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 NTN3O00634 580 aaPredicted RBP13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 TOR1BO14657 336 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 ANXA6P08133 673 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 XPAP23025 273 aaPredicted RBP13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 PCK1P35558 622 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 HCAR3P49019 387 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 SRP54P61011 504 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 SKOR1P84550 965 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 SLC25A11Q02978 314 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 ACAP1Q15027 740 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 ENPP7Q6UWV6 458 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 DPPA4Q7L190 304 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 RD3Q7Z3Z2 195 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 PSTKQ8IV42 348 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 CCL4L1Q8NHW4 92 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 FCRL3Q96P31 734 aaPredicted RBP13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 CSPG4P5Q96PW8 444 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 CINPQ9BW66 212 aaPredicted RBP13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 C1QTNF7Q9BXJ2 289 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 EDEM3Q9BZQ6 932 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 THAP2Q9H0W7 228 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 ABCG4Q9H172 646 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 ATP13A3Q9H7F0 1226 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 B4GALT6Q9UBX8 382 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 PADI4Q9UM07 663 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 NENFQ9UMX5 172 aa13.91□□□□□ -0.18
GTF3C1-211ENST00000569653 A0A1W2PQM1 296 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 DAPK3O43293 454 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 HTRA2O43464 458 aaPredicted RBP13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 MAFKO60675 156 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 RNF8O76064 485 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 FUCA1P04066 466 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 CD48P09326 243 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 RARAP10276 462 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 LHCGRP22888 699 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 IL4RP24394 825 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 SERPINA4P29622 427 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 SCNN1BP51168 640 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 FANCCQ00597 558 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 NSUN2Q08J23 767 aaKnown RBP eCLIP13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 TRAF2Q12933 501 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 MMRN1Q13201 1228 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 MTM1Q13496 603 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 LBRQ14739 615 aaKnown RBP13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 GRM3Q14832 879 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 FIGNQ5HY92 759 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 TMCO4Q5TGY1 634 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 PPP1R2P3Q6NXS1 205 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 ERAP2Q6P179 960 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 LRRC69Q6ZNQ3 347 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 ARL10Q8N8L6 244 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 SPOCK2Q92563 424 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 CCDC74AQ96AQ1 378 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 COQ10AQ96MF6 247 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 WDR92Q96MX6 357 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 RBM15Q96T37 977 aaKnown RBP eCLIP13.9□□□□□ -0.183e-8■■■■■ 33.2
GTF3C1-211ENST00000569653 ZWILCHQ9H900 591 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 NOD2Q9HC29 1040 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 CPNE5Q9HCH3 593 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 PCDH18Q9HCL0 1135 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 SSUH2Q9Y2M2 353 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 PCDHGC4Q9Y5F7 938 aa13.9□□□□□ -0.18
GTF3C1-211ENST00000569653 A0A087X0T9 212 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 RRP8O43159 456 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 RASGRP1O95267 797 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 FAM228BP0C875 321 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 ARSEP51690 589 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 UBASH3AP57075 661 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 PCBP4P57723 403 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 KIAA1024LP59773 190 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 MAXP61244 160 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 AP1S1P61966 158 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 CCL7P80098 99 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 BCL2L1Q07817 233 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 RFTN1Q14699 578 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 CNGA3Q16281 694 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 IGF2-ASQ6U949 168 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms