RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 DPPA4Q7L190 304 aa23.56■■□□□ 1.36
RAB40C-212ENST00000569575 IFT20Q8IY31 132 aa23.56■■□□□ 1.36
RAB40C-212ENST00000569575 DNAAF3Q8N9W5 541 aa23.56■■□□□ 1.36
RAB40C-212ENST00000569575 PHACTR1Q9C0D0 580 aa23.56■■□□□ 1.36
RAB40C-212ENST00000569575 BFARQ9NZS9 450 aa23.56■■□□□ 1.36
RAB40C-212ENST00000569575 FADS3Q9Y5Q0 445 aa23.56■■□□□ 1.36
RAB40C-212ENST00000569575 PLXND1Q9Y4D7 1925 aa23.56■■□□□ 1.36
RAB40C-212ENST00000569575 MAGEB16A2A368 324 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 TUBBP07437 444 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 VIPR1P32241 457 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 RPL21P46778 160 aaKnown RBP23.55■■□□□ 1.36
RAB40C-212ENST00000569575 CSTF1Q05048 431 aaKnown RBP23.55■■□□□ 1.36
RAB40C-212ENST00000569575 CUL1Q13616 776 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 MAP7D1Q3KQU3 841 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 DENND5AQ6IQ26 1287 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 KIAA1161Q6NSJ0 714 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 NLRP9Q7RTR0 991 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 ZSWIM9Q86XI8 627 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 OR2T34Q8NGX1 318 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 BRSK1Q8TDC3 778 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 PTCD2Q8WV60 388 aaKnown RBP23.55■■□□□ 1.36
RAB40C-212ENST00000569575 ASB12Q8WXK4 309 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 PEX13Q92968 403 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 IL22Q9GZX6 179 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 CDH19Q9H159 772 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 PCDH12Q9NPG4 1184 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 RAD18Q9NS91 495 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 POLR3BQ9NW08 1133 aaPredicted RBP23.55■■□□□ 1.36
RAB40C-212ENST00000569575 WSB2Q9NYS7 404 aaPredicted RBP23.55■■□□□ 1.36
RAB40C-212ENST00000569575 SNX24Q9Y343 169 aa23.55■■□□□ 1.36
RAB40C-212ENST00000569575 RGSL1A5PLK6 1076 aa23.54■■□□□ 1.36
RAB40C-212ENST00000569575 F5H423 210 aaPredicted RBP23.54■■□□□ 1.36
RAB40C-212ENST00000569575 NEMP1O14524 444 aa23.54■■□□□ 1.36
RAB40C-212ENST00000569575 GALR2O43603 387 aaPredicted RBP23.54■■□□□ 1.36
RAB40C-212ENST00000569575 CRTAMO95727 393 aa23.54■■□□□ 1.36
RAB40C-212ENST00000569575 MMP12P39900 470 aa23.54■■□□□ 1.36
RAB40C-212ENST00000569575 ARHGEF7Q14155 803 aa23.54■■□□□ 1.36
RAB40C-212ENST00000569575 ZDHHC20Q5W0Z9 365 aa23.54■■□□□ 1.36
RAB40C-212ENST00000569575 MAML2Q8IZL2 1156 aaPredicted RBP23.54■■□□□ 1.36
RAB40C-212ENST00000569575 CADM4Q8NFZ8 388 aa23.54■■□□□ 1.36
RAB40C-212ENST00000569575 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.54■■□□□ 1.367e-7■■■■■ 86.8
RAB40C-212ENST00000569575 LRRC39Q96DD0 335 aa23.54■■□□□ 1.36
RAB40C-212ENST00000569575 RANBP9Q96S59 729 aa23.54■■□□□ 1.36
RAB40C-212ENST00000569575 SLC6A17Q9H1V8 727 aa23.54■■□□□ 1.36
RAB40C-212ENST00000569575 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.54■■□□□ 1.36
RAB40C-212ENST00000569575 HNF1BP35680 557 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 ITGA8P53708 1063 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 ADPRHP54922 357 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 RPS21P63220 83 aaKnown RBP23.53■■□□□ 1.36
RAB40C-212ENST00000569575 FAM193AP78312 1265 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 GUCY2DQ02846 1103 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 GALNT3Q14435 633 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 AGERQ15109 404 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 POM121L1PQ3SYA9 428 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 KDELC2Q7Z4H8 507 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 PDIK1LQ8N165 341 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 TAB3Q8N5C8 712 aaPredicted RBP23.53■■□□□ 1.36
RAB40C-212ENST00000569575 OR14C36Q8NHC7 312 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 UBXN4Q92575 508 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 ART4Q93070 314 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 NAT9Q9BTE0 207 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 TRIM31Q9BZY9 425 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 EPB41L5Q9HCM4 733 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 ZSCAN32Q9NX65 697 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 RIMKLBQ9ULI2 386 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 VCANP13611 3396 aa23.53■■□□□ 1.36
RAB40C-212ENST00000569575 KMT2EQ8IZD2 1858 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 IGHV1OR15-9A0A0B4J2B8 117 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 C2orf81A6NN90 581 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 EIF3HO15372 352 aaKnown RBP eCLIP23.52■■□□□ 1.36
RAB40C-212ENST00000569575 MCM3P25205 808 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 HMGCLP35914 325 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 ABL2P42684 1182 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 MAGEA3P43357 314 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 CCR5P51681 352 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 METAP1P53582 386 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 PTPN5P54829 565 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 TAS2R38P59533 333 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 SLC7A5Q01650 507 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 CREB5Q02930 508 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 SPARCL1Q14515 664 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 TAF1AQ15573 450 aaPredicted RBP23.52■■□□□ 1.36
RAB40C-212ENST00000569575 DNAJC21Q5F1R6 531 aaKnown RBP23.52■■□□□ 1.36
RAB40C-212ENST00000569575 TRIM69Q86WT6 500 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 CCNJLQ8IV13 435 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 SLC25A41Q8N5S1 370 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 OR52K1Q8NGK4 314 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 IRF2BPLQ9H1B7 796 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 ZFYVE1Q9HBF4 777 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 GDF3Q9NR23 364 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 GRHL1Q9NZI5 618 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 B4GALT6Q9UBX8 382 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 SERGEFQ9UGK8 458 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 DMGDHQ9UI17 866 aaKnown RBP23.52■■□□□ 1.36
RAB40C-212ENST00000569575 PCDHGA2Q9Y5H1 932 aa23.52■■□□□ 1.36
RAB40C-212ENST00000569575 HEATR9A2RTY3 570 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 SDR42E2A6NKP2 422 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 NDUFS2O75306 463 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 SEMA4FO95754 770 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 ADRA1DP25100 572 aa23.51■■□□□ 1.35
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