RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ARMC12Q5T9G4 340 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 LIPIQ6XZB0 460 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 DPPA4Q7L190 304 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 NDUFAF2Q8N183 169 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 TP53I13Q8NBR0 393 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 SAP25Q8TEE9 199 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 IFT43Q96FT9 208 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 GPR27Q9NS67 375 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 COQ6Q9Y2Z9 468 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 TTLL3Q9Y4R7 772 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 RAI2Q9Y5P3 530 aa13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 COL5A1P20908 1838 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-218ENST00000569569 MACROD2A1Z1Q3 448 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 GRID2IPA4D2P6 1211 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 KCNK1O00180 336 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 FZD6O60353 706 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 ELFN1P0C7U0 828 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 CYP2A6P11509 494 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 CTNNA2P26232 953 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 EPHA8P29322 1005 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 PFN3P60673 137 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 YPEL5P62699 121 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 SIM1P81133 766 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 DSC2Q02487 901 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 ADCY2Q08462 1091 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 RALGDSQ12967 914 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 LRRC14Q15048 493 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 GATAD2AQ86YP4 633 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 SYCE1Q8N0S2 351 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 SLC22A18ASQ8N1D0 253 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 LRRC57Q8N9N7 239 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 CCDC112Q8NEF3 446 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 BAHD1Q8TBE0 780 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 ARRDC2Q8TBH0 407 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 PIH1D2Q8WWB5 315 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 P3H4Q92791 437 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 SCRN2Q96FV2 425 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 CDC6Q99741 560 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 MBNL1Q9NR56 388 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 AMFRQ9UKV5 643 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 BTBD3Q9Y2F9 522 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 EFR3BQ9Y2G0 817 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 PPIL1Q9Y3C6 166 aa13.88□□□□□ -0.19
HERPUD1-218ENST00000569569 KNTC1P50748 2209 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 SPTY2D1-AS1A0A0U1RR47 76 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 SPAARA0A1B0GVQ0 90 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 ARHGAP6O43182 974 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 PDHA1P08559 390 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 CA4P22748 312 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 VIPR1P32241 457 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 IGFALSP35858 605 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 CETN2P41208 172 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 PEX5P50542 639 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 RWDD2BP57060 319 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 NIPAL4Q0D2K0 466 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 ZBTB17Q13105 803 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 PDE1CQ14123 709 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 PTK2BQ14289 1009 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 WSCD2Q2TBF2 565 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 TEX44Q53QW1 395 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 GLRX5Q86SX6 157 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 NT5DC3Q86UY8 548 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 RNF10Q8N5U6 811 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 CNTD1Q8N815 330 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 TFB1MQ8WVM0 346 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 KCTD5Q9NXV2 234 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 SAE1Q9UBE0 346 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 B4GALT6Q9UBX8 382 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 TRIM10Q9UDY6 481 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 ADGRG1Q9Y653 693 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 PTPRBP23467 1997 aa13.87□□□□□ -0.19
HERPUD1-218ENST00000569569 LRP4O75096 1905 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 A0A0U1RQJ8 604 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 A8MX80 341 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 RECQL5O94762 991 aaPredicted RBP13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 PECAM1P16284 738 aaPredicted RBP13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 PMLP29590 882 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 THOP1P52888 689 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 EPHB1P54762 984 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 ARHGEF7Q14155 803 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 FZD2Q14332 565 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 IHHQ14623 411 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 IRF4Q15306 451 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 BBS12Q6ZW61 710 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 USP45Q70EL2 814 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 KANSL1Q7Z3B3 1105 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 PEX26Q7Z412 305 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 PARGQ86W56 976 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 LRRC8AQ8IWT6 810 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 MCCC1Q96RQ3 725 aaPredicted RBP13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 HEMGNQ9BXL5 484 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 TDRD1Q9BXT4 1180 aaKnown RBP13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 TSGA10Q9BZW7 698 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 DNAJC28Q9NX36 388 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 SEPT10Q9P0V9 454 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 CHKBQ9Y259 395 aa13.86□□□□□ -0.19
HERPUD1-218ENST00000569569 A0A0J9YYE9 177 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 MIF4GDA9UHW6 222 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 HACD1B0YJ81 288 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms