RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ERAP2Q6P179 960 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 BRAT1Q6PJG6 821 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 GCNT7Q6ZNI0 430 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 GLRX5Q86SX6 157 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 CHCHD4Q8N4Q1 142 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 EID2Q8N6I1 236 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 MNS1Q8NEH6 495 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 FAM174AQ8TBP5 190 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 SAP25Q8TEE9 199 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 MAIP1Q8WWC4 291 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 RNF157Q96PX1 679 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 C1QTNF7Q9BXJ2 289 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 C1QTNF2Q9BXJ5 285 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 FTSJ1Q9UET6 329 aa14.59□□□□□ -0.07
COMMD4-225ENST00000569245 TTC24A2A3L6 582 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-225ENST00000569245 POM121BA6NF01 834 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 SPINT1O43278 529 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 TNFSF14O43557 240 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 SDC3O75056 442 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 TM7SF2O76062 418 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 TJP3O95049 919 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 ATXN1LP0C7T5 689 aaKnown RBP14.58□□□□□ -0.08
COMMD4-225ENST00000569245 EPHA8P29322 1005 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-225ENST00000569245 TFDP2Q14188 446 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 ANKRD20A8PQ5CZ79 823 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 ABI3BPQ7Z7G0 1075 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 DCP2Q8IU60 420 aaKnown RBP14.58□□□□□ -0.08
COMMD4-225ENST00000569245 BMFQ96LC9 184 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 LENG8Q96PV6 779 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-225ENST00000569245 PSKH2Q96QS6 385 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 HERPUD2Q9BSE4 406 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 SCNM1Q9BWG6 230 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 PCDH12Q9NPG4 1184 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 SMARCAL1Q9NZC9 954 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 PLXNA2O75051 1894 aa14.58□□□□□ -0.08
COMMD4-225ENST00000569245 CEP295Q9C0D2 2601 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 CCDC188H7C350 402 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 MUSKO15146 869 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 MAFKO60675 156 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 LDOC1O95751 146 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-225ENST00000569245 PRKCGP05129 697 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 KRT10P13645 584 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 HSPA9P38646 679 aaKnown RBP14.57□□□□□ -0.08
COMMD4-225ENST00000569245 RABIFP47224 123 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 AP1S1P61966 158 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 POLR2LP62875 67 aaKnown RBP14.57□□□□□ -0.08
COMMD4-225ENST00000569245 SEMG2Q02383 582 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 ITKQ08881 620 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 SIX1Q15475 284 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-225ENST00000569245 ZNF542PQ5EBM4 170 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 MARC1Q5VT66 337 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 SLC9A4Q6AI14 798 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 KYAT3Q6YP21 454 aaKnown RBP14.57□□□□□ -0.08
COMMD4-225ENST00000569245 BBS12Q6ZW61 710 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 SLCO6A1Q86UG4 719 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 LRRC49Q8IUZ0 686 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 SPATA4Q8NEY3 305 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 PCDH19Q8TAB3 1148 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 BAHD1Q8TBE0 780 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-225ENST00000569245 PDCD6IPQ8WUM4 868 aaKnown RBP14.57□□□□□ -0.08
COMMD4-225ENST00000569245 ASB12Q8WXK4 309 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 CARD6Q9BX69 1037 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 HEMGNQ9BXL5 484 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 MAK16Q9BXY0 300 aaKnown RBP14.57□□□□□ -0.08
COMMD4-225ENST00000569245 SCUBE2Q9NQ36 999 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 DNAJC28Q9NX36 388 aa14.57□□□□□ -0.08
COMMD4-225ENST00000569245 CHD5Q8TDI0 1954 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-225ENST00000569245 TCRBV7S2A1N4TA0A589 114 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 TSPAN11A1L157 253 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 CTAGE15A4D2H0 777 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 RIOK3O14730 519 aaKnown RBP14.56□□□□□ -0.08
COMMD4-225ENST00000569245 MFSD11O43934 449 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 LZTS3O60299 673 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-225ENST00000569245 CST8O60676 142 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 NEBLO76041 1014 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 SLU7O95391 586 aaKnown RBP14.56□□□□□ -0.08
COMMD4-225ENST00000569245 CTAGE8P0CG41 777 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 ZFXP17010 805 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-225ENST00000569245 MMP13P45452 471 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 LIG3P49916 1009 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 ADCY2Q08462 1091 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 PDE1CQ14123 709 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-225ENST00000569245 LLGL1Q15334 1064 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 TMEM52BQ4KMG9 183 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 KAZNQ674X7 775 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 NCBP2-AS2Q69YL0 99 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 CTAGE6Q86UF2 777 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 RFX6Q8HWS3 928 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 CTAGE4Q8IX94 777 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 SLC22A18ASQ8N1D0 253 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 PQLC3Q8N755 202 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 DENND6BQ8NEG7 585 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 CNDP2Q96KP4 475 aaKnown RBP14.56□□□□□ -0.08
COMMD4-225ENST00000569245 KLF6Q99612 283 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-225ENST00000569245 WASF3Q9UPY6 502 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 ATP8A1Q9Y2Q0 1164 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 COQ6Q9Y2Z9 468 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 PCDHGC4Q9Y5F7 938 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 CHD8Q9HCK8 2581 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms