RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 FOXJ1Q92949 421 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 LRRC45Q96CN5 670 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 LRRC40Q9H9A6 602 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 B4GALT6Q9UBX8 382 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 EML5Q05BV3 1969 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 PLXND1Q9Y4D7 1925 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-224ENST00000568877 A0A1W2PQU0 124 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 NPIPB15A6NHN6 443 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-224ENST00000568877 ERI2A8K979 691 aaKnown RBP16.81■□□□□ 0.28
COMMD4-224ENST00000568877 A8MX80 341 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 E7EVH7 732 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 AP2A1O95782 977 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 ALPIP09923 528 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 CYP2A6P11509 494 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-224ENST00000568877 HLA-DPA1P20036 260 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 VIPR1P32241 457 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 HNF1BP35680 557 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 LMAN1P49257 510 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 VPS41P49754 854 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 CCR5P51681 352 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 PPP2CBP62714 309 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 RPS21P63220 83 aaKnown RBP16.81■□□□□ 0.28
COMMD4-224ENST00000568877 PPP2CAP67775 309 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 BASP1P80723 227 aaKnown RBP16.81■□□□□ 0.28
COMMD4-224ENST00000568877 RALGDSQ12967 914 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 GPS1Q13098 491 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 DHX34Q14147 1143 aaKnown RBP16.81■□□□□ 0.28
COMMD4-224ENST00000568877 SPARCL1Q14515 664 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 PTPRRQ15256 657 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 KIAA1161Q6NSJ0 714 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 PRR23BQ6ZRT6 265 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 SYDE1Q6ZW31 735 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-224ENST00000568877 TRIM69Q86WT6 500 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 HORMAD1Q86X24 394 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 SLC41A1Q8IVJ1 513 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 SLC25A41Q8N5S1 370 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 CXorf40AQ8TE69 158 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 BIRC7Q96CA5 298 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 SMIM14Q96QK8 99 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 TBL1YQ9BQ87 522 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 WRAP53Q9BUR4 548 aaKnown RBP16.81■□□□□ 0.28
COMMD4-224ENST00000568877 EPC1Q9H2F5 836 aa16.81■□□□□ 0.28
COMMD4-224ENST00000568877 ZFR2Q9UPR6 939 aaKnown RBP16.81■□□□□ 0.28
COMMD4-224ENST00000568877 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-224ENST00000568877 ANKRD36A6QL64 1941 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 CAPN8A6NHC0 703 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 MMP20O60882 483 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 USP12O75317 370 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 FSBPO95073 299 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 FGF1P05230 155 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 IGHV4-34P06331 123 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 APRTP07741 180 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 PTGER3P43115 390 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 CHRNA4P43681 627 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 LIG3P49916 1009 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 OLIG2Q13516 323 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 PTK6Q13882 451 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 TMEM259Q4ZIN3 620 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 SYCP2LQ5T4T6 812 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 SEL1L3Q68CR1 1132 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 CRTC1Q6UUV9 634 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 MNS1Q8NEH6 495 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 CCHCR1Q8TD31 782 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 HSPA12BQ96MM6 686 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 LYSMD1Q96S90 227 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 APOL2Q9BQE5 337 aa16.8■□□□□ 0.28
COMMD4-224ENST00000568877 TPX2Q9ULW0 747 aaKnown RBP16.8■□□□□ 0.28
COMMD4-224ENST00000568877 IGLON5A6NGN9 336 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 MEI4A8MW99 385 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 TTI1O43156 1089 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 LATO43561 262 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 SUN1O94901 812 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 HEXIM1O94992 359 aaKnown RBP16.79■□□□□ 0.28
COMMD4-224ENST00000568877 ELFN1P0C7U0 828 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 LHCGRP22888 699 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 MAT2AP31153 395 aaKnown RBP16.79■□□□□ 0.28
COMMD4-224ENST00000568877 DHPSP49366 369 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-224ENST00000568877 ARHGEF7Q14155 803 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 ZNF284Q2VY69 593 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 DNTTIP2Q5QJE6 756 aaKnown RBP16.79■□□□□ 0.28
COMMD4-224ENST00000568877 NAPEPLDQ6IQ20 393 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 LIPIQ6XZB0 460 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 ARMCX6Q7L4S7 300 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 MAATS1Q7Z4T9 603 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 LINC00523Q86TU6 105 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 TSPAN33Q86UF1 283 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 JAMLQ86YT9 394 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 SRPK1Q96SB4 655 aaKnown RBP16.79■□□□□ 0.28
COMMD4-224ENST00000568877 SLC17A9Q9BYT1 436 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 ARNT2Q9HBZ2 717 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 MAGEE1Q9HCI5 957 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 EIF2B3Q9NR50 452 aaKnown RBP16.79■□□□□ 0.28
COMMD4-224ENST00000568877 FAM86C1Q9NVL1 165 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 ASIC3Q9UHC3 531 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 RAB23Q9ULC3 237 aa16.79■□□□□ 0.28
COMMD4-224ENST00000568877 TM7SF2O76062 418 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 PIRTP0C851 137 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 C6P13671 934 aa16.78■□□□□ 0.28
COMMD4-224ENST00000568877 ZNF30P17039 623 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms