RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 BOD1L1Q8NFC6 3051 aa8.46□□□□□ -1.06
TSC2-223ENST00000568566 TLN1Q9Y490 2541 aaKnown RBP8.46□□□□□ -1.06
TSC2-223ENST00000568566 CHD5Q8TDI0 1954 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 COL12A1Q99715 3063 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 EDDM13A0A1B0GTR0 161 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 CCDC66A2RUB6 948 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 TRIM38O00635 465 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 SPINT1O43278 529 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 SIGLEC6O43699 453 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 MT-CO3P00414 261 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 JCHAINP01591 159 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 HLA-DQB2P05538 268 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 MAT2AP31153 395 aaKnown RBP8.45□□□□□ -1.06
TSC2-223ENST00000568566 CHRNA3P32297 505 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 SLC8A1P32418 973 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 HTR7P34969 479 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 DRD3P35462 400 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 GARSP41250 739 aaKnown RBP8.45□□□□□ -1.06
TSC2-223ENST00000568566 CCR5P51681 352 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 CCNHP51946 323 aaPredicted RBP8.45□□□□□ -1.06
TSC2-223ENST00000568566 GABREP78334 506 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 RHDQ02161 417 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 DSC2Q02487 901 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 SULT2A1Q06520 285 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 IL10RBQ08334 325 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 CNTN1Q12860 1018 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 SFSWAPQ12872 951 aaKnown RBP8.45□□□□□ -1.06
TSC2-223ENST00000568566 RPS6KA1Q15418 735 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 MYLK3Q32MK0 819 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 PROX2Q3B8N5 592 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 CARD16Q5EG05 197 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 TFDP3Q5H9I0 405 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 ACBD5Q5T8D3 534 aaPredicted RBP8.45□□□□□ -1.06
TSC2-223ENST00000568566 BROXQ5VW32 411 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 NAPEPLDQ6IQ20 393 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 BBS12Q6ZW61 710 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 KANSL1Q7Z3B3 1105 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 CAMK1DQ8IU85 385 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 MAP7D3Q8IWC1 876 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 RYBPQ8N488 228 aaPredicted RBP8.45□□□□□ -1.06
TSC2-223ENST00000568566 TAB3Q8N5C8 712 aaPredicted RBP8.45□□□□□ -1.06
TSC2-223ENST00000568566 ACTL9Q8TC94 416 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 C1orf54Q8WWF1 131 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 FUBP1Q96AE4 644 aaKnown RBP8.45□□□□□ -1.06
TSC2-223ENST00000568566 SP110Q9HB58 689 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 NT5MQ9NPB1 228 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 SEPT10Q9P0V9 454 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 RCOR3Q9P2K3 495 aaPredicted RBP8.45□□□□□ -1.06
TSC2-223ENST00000568566 HECAQ9UBI9 543 aaPredicted RBP8.45□□□□□ -1.06
TSC2-223ENST00000568566 UBA2Q9UBT2 640 aaPredicted RBP8.45□□□□□ -1.06
TSC2-223ENST00000568566 CA5BQ9Y2D0 317 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 DOCK9Q9BZ29 2069 aa8.45□□□□□ -1.06
TSC2-223ENST00000568566 UBR5O95071 2799 aaPredicted RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 TBC1D3DA0A087WVF3 549 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 TBC1D3IA0A087WXS9 549 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 TBC1D3EA0A087X179 549 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 TBC1D3KA0A087X1G2 549 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 TARSL2A2RTX5 802 aaKnown RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 TBC1D3FA6NER0 549 aaPredicted RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 C10orf142B7Z368 130 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 TBC1D3LB9A6J9 549 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 KRIT1O00522 736 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 MCF2LO15068 1137 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 FFAR2O15552 330 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 SLC28A2O43868 658 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 LEFTY1O75610 366 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 ADH1BP00325 375 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 IL1BP01584 269 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 MMP2P08253 660 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 TBC1D3HP0C7X1 549 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 ETS1P14921 441 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 CR2P20023 1033 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 ACP1P24666 158 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 RBL1P28749 1068 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 CD68P34810 354 aaPredicted RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 RXRGP48443 463 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 CLCN6P51797 869 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 UCNP55089 124 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 TAS2R38P59533 333 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 RHOAP61586 193 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 DAB2P98082 770 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 OTUD4Q01804 1114 aaKnown RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 WASHC5Q12768 1159 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 KLF1Q13351 362 aaPredicted RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 OLIG2Q13516 323 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 SNX1Q13596 522 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 LBRQ14739 615 aaKnown RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 PRKD1Q15139 912 aaPredicted RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 PPP2R5EQ16537 467 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 IFI16Q16666 785 aaKnown RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 TBC1D3GQ6DHY5 549 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 TBC1D3CQ6IPX1 549 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 RETSATQ6NUM9 610 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 SRLQ86TD4 932 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 TBC1D3Q8IZP1 549 aaPredicted RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 SYCE1Q8N0S2 351 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 OXR1Q8N573 874 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 ATPAF2Q8N5M1 289 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 GLIS1Q8NBF1 620 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms