RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 PRPSAP1Q14558 356 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 ARMC12Q5T9G4 340 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 AGBL4Q5VU57 503 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 TTC7BQ86TV6 843 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 KLHL7Q8IXQ5 586 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 PGBD3Q8N328 593 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 CBARPQ8N350 705 aaPredicted RBP12.7□□□□□ -0.38
SF3B3-206ENST00000565990 HDDC3Q8N4P3 179 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 RAB7BQ96AH8 199 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 SCRN2Q96FV2 425 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 FEM1CQ96JP0 617 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 EPN3Q9H201 632 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 KDM4CQ9H3R0 1056 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 ARNT2Q9HBZ2 717 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 FBXL12Q9NXK8 326 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 BCCIPQ9P287 314 aaKnown RBP eCLIP12.7□□□□□ -0.38
SF3B3-206ENST00000565990 SERGEFQ9UGK8 458 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 CHKBQ9Y259 395 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 TTLL3Q9Y4R7 772 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 LRRK1Q38SD2 2015 aa12.7□□□□□ -0.38
SF3B3-206ENST00000565990 AREL1O15033 823 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 AP1G1O43747 822 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 SUN1O94901 812 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 GAS8O95995 478 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 MYZAPP0CAP1 466 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 ACADMP11310 421 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 ADRB3P13945 408 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 CA4P22748 312 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 CNR2P34972 360 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 PXNP49023 591 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-206ENST00000565990 PTK6Q13882 451 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 NUMA1Q14980 2115 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 ANGPT1Q15389 498 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 TTC31Q49AM3 519 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-206ENST00000565990 USP39Q53GS9 565 aaKnown RBP12.69□□□□□ -0.38
SF3B3-206ENST00000565990 DENND5AQ6IQ26 1287 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 NEK5Q6P3R8 708 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 FBXL19Q6PCT2 694 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 KIAA1324Q6UXG2 1013 aaKnown RBP12.69□□□□□ -0.38
SF3B3-206ENST00000565990 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-206ENST00000565990 PARS2Q7L3T8 475 aaKnown RBP12.69□□□□□ -0.38
SF3B3-206ENST00000565990 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.69□□□□□ -0.38
SF3B3-206ENST00000565990 PDCD7Q8N8D1 485 aaKnown RBP12.69□□□□□ -0.38
SF3B3-206ENST00000565990 ZBTB44Q8NCP5 570 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 CCHCR1Q8TD31 782 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 BCAS4Q8TDM0 211 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 PRRX2Q99811 253 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 OMDQ99983 421 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 ADGRE3Q9BY15 652 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 CNOT10Q9H9A5 744 aaKnown RBP12.69□□□□□ -0.38
SF3B3-206ENST00000565990 WSB2Q9NYS7 404 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-206ENST00000565990 UBP1Q9NZI7 540 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 NCKAP1Q9Y2A7 1128 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 PCDHB9Q9Y5E1 797 aa12.69□□□□□ -0.38
SF3B3-206ENST00000565990 IGHV1OR15-9A0A0B4J2B8 117 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 PLK4O00444 970 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 PLRG1O43660 514 aaKnown RBP12.68□□□□□ -0.38
SF3B3-206ENST00000565990 LILRB5O75023 590 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 PPFIA2O75334 1257 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 PMPCBO75439 489 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 RNASEH2AO75792 299 aaKnown RBP12.68□□□□□ -0.38
SF3B3-206ENST00000565990 AP2A1O95782 977 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 AGTP01019 485 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 ATXN1LP0C7T5 689 aaKnown RBP12.68□□□□□ -0.38
SF3B3-206ENST00000565990 ECHS1P30084 290 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 ACSL1P33121 698 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 FNTBP49356 437 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 NEK3P51956 506 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 HLTFQ14527 1009 aaKnown RBP eCLIP12.68□□□□□ -0.38
SF3B3-206ENST00000565990 TRIP13Q15645 432 aaPredicted RBP12.68□□□□□ -0.38
SF3B3-206ENST00000565990 SLC1A5Q15758 541 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 CDKN3Q16667 212 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 POM121L1PQ3SYA9 428 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 TMEM52BQ4KMG9 183 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 TAX1BP1Q86VP1 789 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 HOOK3Q86VS8 718 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 FRMD1Q8N878 549 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 IFT81Q8WYA0 676 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 ARL8AQ96BM9 186 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 CENPTQ96BT3 561 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 MCCC1Q96RQ3 725 aaPredicted RBP12.68□□□□□ -0.38
SF3B3-206ENST00000565990 LYSMD1Q96S90 227 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 SGK2Q9HBY8 427 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 DYRK4Q9NR20 520 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 EIF2B3Q9NR50 452 aaKnown RBP12.68□□□□□ -0.38
SF3B3-206ENST00000565990 RAB6BQ9NRW1 208 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 ZSCAN32Q9NX65 697 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 MBD1Q9UIS9 605 aaPredicted RBP12.68□□□□□ -0.38
SF3B3-206ENST00000565990 PLAAQ9Y263 795 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 FADS3Q9Y5Q0 445 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 ABCA7Q8IZY2 2146 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 WDFY4Q6ZS81 3184 aa12.68□□□□□ -0.38
SF3B3-206ENST00000565990 TRPM6Q9BX84 2022 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 A0A0J9YYE9 177 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 UPK3BL1B0FP48 263 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 UPK3BL2E5RIL1 263 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 TTI1O43156 1089 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 SPINT1O43278 529 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 HRO43593 1189 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 TSPAN6O43657 245 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms