RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 SPATS2Q86XZ4 545 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 DCP2Q8IU60 420 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 NAXDQ8IW45 347 aa13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 CNTD1Q8N815 330 aa13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 DENND6BQ8NEG7 585 aa13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 SETD7Q8WTS6 366 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 SPOCK2Q92563 424 aa13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 BMFQ96LC9 184 aa13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 ALS2CR12Q96Q35 445 aa13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 KLF6Q99612 283 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 SEMA3CQ99985 751 aa13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 C1QTNF7Q9BXJ2 289 aa13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 POLR1EQ9GZS1 481 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 ATP8A1Q9Y2Q0 1164 aa13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 PCDHB9Q9Y5E1 797 aa13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 PCDHGC4Q9Y5F7 938 aa13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 GOLGA4Q13439 2230 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-210ENST00000565966 CFAP69A5D8W1 941 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 POM121BA6NF01 834 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 A6NNZ2 444 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 RAD51BO15315 384 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 FLRT2O43155 660 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 ADRB1P08588 477 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 NFKBIAP25963 317 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 MMP12P39900 470 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 RXRGP48443 463 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 CLDN2P57739 230 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 FAM193AP78312 1265 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 DSC2Q02487 901 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 NIPAL4Q0D2K0 466 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 TRAF2Q12933 501 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 IHHQ14623 411 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 NOMO1Q15155 1222 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 FAM182AQ5T1J6 154 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 N4BP2L1Q5TBK1 243 aaPredicted RBP13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 CCDC181Q5TID7 509 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 KYAT3Q6YP21 454 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 Q6ZSR6 202 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 ZC3H18Q86VM9 953 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 REXO1L1PQ8IX06 675 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 ARRDC2Q8TBH0 407 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 RHBDD1Q8TEB9 315 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 PDCD6IPQ8WUM4 868 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 TFB1MQ8WVM0 346 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 CENPTQ96BT3 561 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 CAMK1GQ96NX5 476 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 WRAP53Q9BUR4 548 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 PHTF1Q9UMS5 762 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 TTLL3Q9Y4R7 772 aa13.91□□□□□ -0.18
HERPUD1-210ENST00000565966 HACD1B0YJ81 288 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 TJP3O95049 919 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 PRKCGP05129 697 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 RABIFP47224 123 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 LIG3P49916 1009 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 IL9RQ01113 521 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 OTUD4Q01804 1114 aaKnown RBP13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 XRCC4Q13426 336 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 AGERQ15109 404 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 SHBQ15464 509 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 TRIP6Q15654 476 aaKnown RBP13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 PTAR1Q7Z6K3 402 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 TRIM58Q8NG06 486 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 OR13H1Q8NG92 308 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 ACTL9Q8TC94 416 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 QKIQ96PU8 341 aaKnown RBP eCLIP13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 CEP41Q9BYV8 373 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 SEPT10Q9P0V9 454 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 PCOLCE2Q9UKZ9 415 aa13.9□□□□□ -0.18
HERPUD1-210ENST00000565966 NCOR2Q9Y618 2525 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 H7C0C1 242 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 TOR1BO14657 336 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 ZSCAN12O43309 604 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 LZTS3O60299 673 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 CBFA2T3O75081 653 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 PGLSO95336 258 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 CPP00450 1065 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 ITGAVP06756 1048 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 MMP2P08253 660 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 C6P13671 934 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 PTPN3P26045 913 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 GRK6P43250 576 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 ATP5OP48047 213 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 SEMG2Q02383 582 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 CCDC173Q0VFZ6 552 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 WASHC5Q12768 1159 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 BNIP3Q12983 259 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 KLF1Q13351 362 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 RPS6KA1Q15418 735 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 INAVAQ3KP66 663 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 TEX44Q53QW1 395 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 ARMC12Q5T9G4 340 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 LIPIQ6XZB0 460 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 DPPA4Q7L190 304 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 NDUFAF2Q8N183 169 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 TP53I13Q8NBR0 393 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 SAP25Q8TEE9 199 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 IFT43Q96FT9 208 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 AGAP3Q96P47 875 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 TLR10Q9BXR5 811 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms