RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 NAPEPLDQ6IQ20 393 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 TMCO3Q6UWJ1 677 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 ZNF782Q6ZMW2 699 aaPredicted RBP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 DCDC5Q6ZRR9 648 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 ZNF589Q86UQ0 364 aaPredicted RBP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 ULK2Q8IYT8 1036 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 C12orf76Q8N812 135 aaPredicted RBP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 TRIML1Q8N9V2 468 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 PPP1R13BQ96KQ4 1090 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 IKZF4Q9H2S9 585 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 STN1Q9H668 368 aaKnown RBP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 DDX4Q9NQI0 724 aaKnown RBP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 MTMR4Q9NYA4 1195 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 PSD3Q9NYI0 1048 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 FBXO40Q9UH90 709 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 PA2G4Q9UQ80 394 aaKnown RBP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 A0A0G2JMZ2 1700 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 NPIPB13A6NJU9 1138 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 A6NLC8 198 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 NPIPB5A8MRT5 1133 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 NPIPB4C9JG80 1138 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 SPTLC2O15270 562 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 JAK2O60674 1132 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 PEX11BO96011 259 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 ST6GAL1P15907 406 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 CD53P19397 219 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 RARRES1P49788 294 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 TFF2Q03403 129 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 FAM180BQ6P0A1 224 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 TATDN1Q6P1N9 297 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 MNS1Q8NEH6 495 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 SLC2A12Q8TD20 617 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 WASF1Q92558 559 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 USP28Q96RU2 1077 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 ZNF347Q96SE7 839 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 MOV10L1Q9BXT6 1211 aaKnown RBP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 GPR63Q9BZJ6 419 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 MAF1Q9H063 256 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 PDE11AQ9HCR9 933 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 ZDHHC7Q9NXF8 308 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 CWC15Q9P013 229 aaKnown RBP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 DBNLQ9UJU6 430 aaKnown RBP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 ZHX1Q9UKY1 873 aaPredicted RBP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 FZD4Q9ULV1 537 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 PCDHA7Q9UN72 937 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 SH2B3Q9UQQ2 575 aa4.43□□□□□ -1.7
LINC00561-201ENST00000565815 SIRT4Q9Y6E7 314 aaPredicted RBP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 COL11A1P12107 1806 aaPredicted RBP4.43□□□□□ -1.7
LINC00561-201ENST00000565815 C17orf100A8MU93 164 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 RNF113AO15541 343 aaKnown RBP4.42□□□□□ -1.7
LINC00561-201ENST00000565815 STX10O60499 249 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 ONECUT2O95948 504 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 MT-CO3P00414 261 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 MCM7P33993 719 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 MYL5Q02045 173 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 ABHD18Q0P651 414 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 IMMTQ16891 758 aaKnown RBP4.42□□□□□ -1.7
LINC00561-201ENST00000565815 AP5B1Q2VPB7 878 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 ATG16L1Q676U5 607 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 EXD3Q8N9H8 876 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 C8orf76Q96K31 380 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 REEP2Q9BRK0 252 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 EFHD1Q9BUP0 239 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 LMAN2LQ9H0V9 348 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 TOR3AQ9H497 397 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 GOLPH3LQ9H4A5 285 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 PDGFCQ9NRA1 345 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 SNX15Q9NRS6 342 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 PAG1Q9NWQ8 432 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 PDP2Q9P2J9 529 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 DERAQ9Y315 318 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 HEMK1Q9Y5R4 338 aaPredicted RBP4.42□□□□□ -1.7
LINC00561-201ENST00000565815 ZMYM6O95789 1325 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 STK36Q9NRP7 1315 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 NID2Q14112 1375 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 CEP290O15078 2479 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 TARM1B6A8C7 271 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 E7EWF7 191 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 WDR46O15213 610 aaKnown RBP4.42□□□□□ -1.7
LINC00561-201ENST00000565815 SMC2O95347 1197 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 CTDNEP1O95476 244 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 C1RP00736 705 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 RFPL3SP0C7P2 107 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 PRPH2P23942 346 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 MECOMQ03112 1051 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 POU5F1BQ06416 359 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 SLC39A14Q15043 492 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 PRR16Q569H4 304 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 MTFR2Q6P444 385 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 TMEM65Q6PI78 240 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 RTL10Q7L3V2 364 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 TTC30AQ86WT1 665 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 GLMPQ8WWB7 406 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 USP13Q92995 863 aaPredicted RBP4.42□□□□□ -1.7
LINC00561-201ENST00000565815 CCDC17Q96LX7 622 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 COQ10AQ96MF6 247 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 CLSTN3Q9BQT9 956 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 TM2D2Q9BX73 214 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 ADGRE3Q9BY15 652 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 UBXN6Q9BZV1 441 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms