RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 SKIV2LQ15477 1246 aaKnown RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 SLC1A5Q15758 541 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 GRK1Q15835 563 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 TMEM95Q3KNT9 176 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 EPC2Q52LR7 807 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 XKR3Q5GH77 459 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 HMBOX1Q6NT76 420 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 PLBD1Q6P4A8 553 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 TMEM65Q6PI78 240 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ADGRD1Q6QNK2 874 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 MAMDC4Q6UXC1 1216 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 FRMD7Q6ZUT3 714 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 USP45Q70EL2 814 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 PGAP1Q75T13 922 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 SLCO6A1Q86UG4 719 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 AMIGO1Q86WK6 493 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF654Q8IZM8 581 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 PGAM4Q8N0Y7 254 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF786Q8N393 782 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 KLHL36Q8N4N3 616 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 EIF4E3Q8N5X7 224 aaKnown RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 Q8N9G6 341 aaPredicted RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 DTX3Q8N9I9 347 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 FAM47BQ8NA70 645 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 FANCBQ8NB91 859 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CAMKVQ8NCB2 501 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CMASQ8NFW8 434 aaPredicted RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 OR7A2PQ8NGA2 310 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 OR6C4Q8NGE1 309 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ADAM32Q8TC27 787 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 IFI44Q8TCB0 444 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ASZ1Q8WWH4 475 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 RELTQ969Z4 430 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ATP6V1E2Q96A05 226 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 MRRFQ96E11 262 aaKnown RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 MTERF3Q96E29 417 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ELMO2Q96JJ3 720 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 SPACA7Q96KW9 195 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 C10orf90Q96M02 699 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 HYLS1Q96M11 299 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 FAM111AQ96PZ2 611 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 KCTD14Q9BQ13 255 aaPredicted RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CCM2Q9BSQ5 444 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 DHRS4Q9BTZ2 278 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 MND1Q9BWT6 205 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 LRRC2Q9BYS8 371 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ZCCHC2Q9C0B9 1178 aaKnown RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 PIGUQ9H490 435 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 PDZD7Q9H5P4 517 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ZFP14Q9HCL3 533 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 MRPS30Q9NP92 439 aaKnown RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 TOPORSQ9NS56 1045 aaPredicted RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 GKN1Q9NS71 199 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 HPF1Q9NWY4 346 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ADPRHL2Q9NX46 363 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CMTM6Q9NX76 183 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 COA4Q9NYJ1 87 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CNTN3Q9P232 1028 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 KLQ9UEF7 1012 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 NDRG3Q9UGV2 375 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ADAMTS1Q9UHI8 967 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 RAPGEFL1Q9UHV5 662 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 PHF11Q9UIL8 331 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 VAV3Q9UKW4 847 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 COPS3Q9UNS2 423 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 LIPT1Q9Y234 373 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 TRAPPC4Q9Y296 219 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 BTBD3Q9Y2F9 522 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CHTOPQ9Y3Y2 248 aaKnown RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 AFG3L2Q9Y4W6 797 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 PCDHGB2Q9Y5G2 931 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 HEMK1Q9Y5R4 338 aaPredicted RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ST14Q9Y5Y6 855 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ACTL7AQ9Y615 435 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 HSPE1-MOB4S4R3N1 261 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CAMTA1Q9Y6Y1 1673 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 A0A0G2JMP0 313 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 A0A1B0GW55 424 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 ACOD1A6NK06 481 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 WASH4PA8MWX3 477 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 C9IYK1 514 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 NT5C1B-RDH14C9J2C7 533 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 STMND1H3BQB6 276 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 I3L521 148 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 FSCN2O14926 492 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 INPPL1O15357 1258 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 PAPSS1O43252 624 aaPredicted RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CHMP2AO43633 222 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 AKAP8O43823 692 aaKnown RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 KLRC4O43908 158 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 TBC1D4O60343 1298 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 HUS1O60921 280 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 KATNA1O75449 491 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SLC22A5O76082 557 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 IPO13O94829 963 aaKnown RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 KCNK2O95069 426 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 RASGRP1O95267 797 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 VAPBO95292 243 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms