RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 SARS2Q9NP81 518 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 PCDHB12Q9Y5F1 795 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PTPRFP10586 1907 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 H3BNX3 289 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 MATN2O00339 956 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PJA2O43164 708 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 XYLBO75191 536 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CNTN5O94779 1100 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 SPRP35270 261 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 GGT5P36269 586 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 XIAPP98170 497 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 SLC25A11Q02978 314 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 BMT2Q1RMZ1 405 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 DUPD1Q68J44 220 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CYP4Z1Q86W10 505 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 AMER2Q8N7J2 671 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 SETD9Q8NE22 299 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 DBF4BQ8NFT6 615 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 KBTBD7Q8WVZ9 684 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 FOXJ1Q92949 421 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 MTFMTQ96DP5 389 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 NMUR1Q9HB89 426 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CCNB1IP1Q9NPC3 277 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 DDIT4Q9NX09 232 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ING3Q9NXR8 418 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 DDX20Q9UHI6 824 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 RUVBL1Q9Y265 456 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 MYOCOSA0A1B0GUC4 107 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PPP6CO00743 305 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 SCGNO76038 276 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 KLHL2O95198 593 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 MGAT1P26572 445 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 FOXN2P32314 431 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 KCNJ2P63252 427 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CUL3Q13618 768 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ITGA7Q13683 1181 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 MMEL1Q495T6 779 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 BTBD8Q5XKL5 378 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TRIM68Q6AZZ1 485 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ZPBP2Q6X784 338 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ZNF483Q8TF39 744 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 BCL7CQ8WUZ0 217 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 CHRAC1Q9NRG0 131 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 HCFC1R1Q9NWW0 138 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 RCOR3Q9P2K3 495 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 BAIAP2L1Q9UHR4 511 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 BSNQ9UPA5 3926 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 C2orf78A6NCI8 922 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TXNDC9O14530 226 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TSPAN4O14817 238 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ITM2AO43736 263 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PHF2O75151 1096 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 C1QCP02747 245 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 COL6A1P12109 1028 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ACADLP28330 430 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 SCNN1BP51168 640 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 SLC12A1Q13621 1099 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 GTF2H3Q13889 308 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CGB2Q6NT52 195 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 RRM2BQ7LG56 351 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 RAVER1Q8IY67 606 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 MAB21L3Q8N8X9 362 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TTLQ8NG68 377 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 OR52K1Q8NGK4 314 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 MIEF2Q96C03 454 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PABPC5Q96DU9 382 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 CORO1BQ9BR76 489 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 BFARQ9NZS9 450 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TMPRSS11EQ9UL52 423 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 FAM155AB1AL88 458 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 E5RI56 91 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CXCL11O14625 94 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 VEGFDO43915 354 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 REM1O75628 298 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PIK3R1P27986 724 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TALDO1P37837 337 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 HARS2P49590 506 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 AP3S2P59780 193 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ACAP2Q15057 778 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CCDC92Q53HC0 331 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 BOLA3Q53S33 107 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CYP4V2Q6ZWL3 525 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 TMEM126BQ8IUX1 230 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PCDH19Q8TAB3 1148 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 SNF8Q96H20 258 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 KCTD15Q96SI1 283 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 SLC6A7Q99884 636 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 NIF3L1Q9GZT8 377 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 C14orf105Q9NVL8 296 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 KLHL28Q9NXS3 571 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 MRPS33Q9Y291 106 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 V9GYQ6 96 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 C17orf102A2RUQ5 167 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PHGDHO43175 533 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 ASS1P00966 412 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 CYP1A2P05177 515 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 NCALDP61601 193 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 UBAP2LQ14157 1087 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 ACCSLQ4AC99 568 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 SPDYAQ5MJ70 313 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms