RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PEBP4Q96S96 227 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 CLPBQ9H078 707 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 PCDHB1Q9Y5F3 818 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 PCDHGA8Q9Y5G5 932 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 PTPRQQ9UMZ3 2332 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 TEX51A0A1B0GUA7 166 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 CACNB4O00305 520 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 TRAFD1O14545 582 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 MUSKO15146 869 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 ATMINO43313 823 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 MPOP05164 745 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 ITPKBP27987 946 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 TRIM23P36406 574 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 SCNN1BP51168 640 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 KIAA1024LP59773 190 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 GABREP78334 506 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 C1orf61Q13536 156 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 LBRQ14739 615 aaKnown RBP12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 IQCB1Q15051 598 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 ALG11Q2TAA5 492 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 BROXQ5VW32 411 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 TMCO3Q6UWJ1 677 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 LIPIQ6XZB0 460 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 CYP4V2Q6ZWL3 525 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 DPPA4Q7L190 304 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 HID1Q8IV36 788 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 SLC35F3Q8IY50 421 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 NIPA2Q8N8Q9 360 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 NSMCE1Q8WV22 266 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 SLC46A1Q96NT5 459 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 RBM15Q96T37 977 aaKnown RBP eCLIP12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 TCEAL2Q9H3H9 227 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 KLQ9UEF7 1012 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 IP6K2Q9UHH9 426 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 PNMA8BQ9ULN7 279 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 COQ6Q9Y2Z9 468 aa12.25□□□□□ -0.45
GTF3C1-204ENST00000564664 HTRA2O43464 458 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 SOCS5O75159 536 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 RECQL5O94762 991 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 ELFN1P0C7U0 828 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 SKILP12757 684 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 KRT10P13645 584 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 PNLIPP16233 465 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 SERPINB6P35237 376 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 RGRP47804 291 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 RP1P56715 2156 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 TLE3Q04726 772 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 TSR1Q2NL82 804 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 OGFOD3Q6PK18 319 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 GPR155Q7Z3F1 870 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 POLNQ7Z5Q5 900 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 ZSWIM9Q86XI8 627 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 SPACA3Q8IXA5 215 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 ARL14Q8N4G2 192 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 PAF1Q8N7H5 531 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 OR56A4Q8NGH8 313 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 WDR36Q8NI36 951 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 TSACCQ96A04 125 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 NUDCD1Q96RS6 583 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 LGMNQ99538 433 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 TRIM7Q9C029 511 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 CAAP1Q9H8G2 361 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 BAHCC1Q9P281 2608 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 RCOR3Q9P2K3 495 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 MYO1AQ9UBC5 1043 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 GULP1Q9UBP9 304 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 PHTF1Q9UMS5 762 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 GPR34Q9UPC5 381 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 ENTPD2Q9Y5L3 495 aa12.24□□□□□ -0.45
GTF3C1-204ENST00000564664 PSMD11O00231 422 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 NTN3O00634 580 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 ATXN7O15265 892 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 SERPING1P05155 500 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 PCCBP05166 539 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 CR2P20023 1033 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 CES1P23141 567 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 CDH6P55285 790 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 ZBED6P86452 979 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 CCDC173Q0VFZ6 552 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 RALGDSQ12967 914 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 EIF3IQ13347 325 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 PEX6Q13608 980 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 SPIDRQ14159 915 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 ZNF235Q14590 738 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 PERM1Q5SV97 790 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 E4F1Q66K89 784 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 CAVIN1Q6NZI2 390 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 PNCKQ6P2M8 343 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 ARHGAP36Q6ZRI8 547 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 NDUFAF2Q8N183 169 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 CBARPQ8N350 705 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 NPWQ8N729 165 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 WBP1Q96G27 269 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 CCDC3Q9BQI4 270 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 FUCA2Q9BTY2 467 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 ASCL3Q9NQ33 180 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 HAUS2Q9NVX0 235 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 LCMT1Q9UIC8 334 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 APPL1Q9UKG1 709 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms