RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CCDC38Q502W7 563 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 ZNF484Q5JVG2 852 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 FAM69BQ5VUD6 431 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 DENND1BQ6P3S1 775 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 FAM122CQ6P4D5 195 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 ZNF771Q7L3S4 317 aaPredicted RBP4.38□□□□□ -1.71
CHD9-212ENST00000564641 DNAAF1Q8NEP3 725 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 SECTM1Q8WVN6 248 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 SORCS1Q8WY21 1168 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 RUBCNQ92622 972 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 MASTLQ96GX5 879 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 HERC2P3Q9BVR0 1158 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 SMARCAL1Q9NZC9 954 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 SRP68Q9UHB9 627 aaKnown RBP4.38□□□□□ -1.71
CHD9-212ENST00000564641 TAGLN3Q9UI15 199 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 SUFUQ9UMX1 484 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 PCDHAC2Q9Y5I4 1007 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 FANCIQ9NVI1 1328 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 IQGAP1P46940 1657 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 NPHP4O75161 1426 aaPredicted RBP4.38□□□□□ -1.71
CHD9-212ENST00000564641 ERBINQ96RT1 1412 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 MED14O60244 1454 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 DUOX2Q9NRD8 1548 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 RNF17Q9BXT8 1623 aaKnown RBP4.37□□□□□ -1.71
CHD9-212ENST00000564641 IGHV4OR15-8A0A075B7B6 117 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 LMX1BO60663 402 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 TIPRLO75663 272 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 PMS2P2O95744 297 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 SERPINB3P29508 390 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 TTKP33981 857 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 PTPN9P43378 593 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 ZRSR2Q15696 482 aaKnown RBP4.37□□□□□ -1.71
CHD9-212ENST00000564641 CBWD5Q5RIA9 395 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 GDPD4Q6W3E5 623 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 MEX3BQ6ZN04 569 aaKnown RBP4.37□□□□□ -1.71
CHD9-212ENST00000564641 MON1AQ86VX9 555 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 SPATA20Q8TB22 786 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 CD101Q93033 1021 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 YME1L1Q96TA2 773 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 ARPC5LQ9BPX5 153 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 CTDSP1Q9GZU7 261 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 EBF2Q9HAK2 575 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 SDF2L1Q9HCN8 221 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 PLCB1Q9NQ66 1216 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.37□□□□□ -1.71
CHD9-212ENST00000564641 VPS8Q8N3P4 1428 aa4.37□□□□□ -1.71
CHD9-212ENST00000564641 SCAF11Q99590 1463 aaKnown RBP4.37□□□□□ -1.71
CHD9-212ENST00000564641 MAST1Q9Y2H9 1570 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 CPED1A4D0V7 1026 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 FAM172BPA6NC97 362 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 FAM155BO75949 473 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 ADAP00813 363 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 TFPIP10646 304 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 HNF1BP35680 557 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 ARL16Q0P5N6 197 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 RBM39Q14498 530 aaKnown RBP4.36□□□□□ -1.71
CHD9-212ENST00000564641 CTXN3Q4LDR2 81 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 CEP85LQ5SZL2 805 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 STPG1Q5TH74 334 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 ADAM5Q6NVV9 412 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 C1orf228Q6PIY5 440 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 IL20RBQ6UXL0 311 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 ENAHQ8N8S7 591 aaPredicted RBP4.36□□□□□ -1.71
CHD9-212ENST00000564641 HSPH1Q92598 858 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 RBM17Q96I25 401 aaKnown RBP4.36□□□□□ -1.71
CHD9-212ENST00000564641 MMP28Q9H239 520 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 HDAC6Q9UBN7 1215 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 DERAQ9Y315 318 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 ANKRD30AQ9BXX3 1397 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 ARHGAP31Q2M1Z3 1444 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 LRRC9Q6ZRR7 1453 aa4.36□□□□□ -1.71
CHD9-212ENST00000564641 KDM5AP29375 1690 aaKnown RBP4.35□□□□□ -1.71
CHD9-212ENST00000564641 NPIPB11E5RHQ5 1161 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 TK1P04183 234 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 CHRM4P08173 479 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 ZNF8P17098 575 aaPredicted RBP4.35□□□□□ -1.71
CHD9-212ENST00000564641 BLKP51451 505 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 PRKAA2P54646 552 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 HDAC4P56524 1084 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 TNFAIP1Q13829 316 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 GRAMD1BQ3KR37 738 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 GLIPR1L2Q4G1C9 344 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 SETMARQ53H47 684 aaPredicted RBP4.35□□□□□ -1.71
CHD9-212ENST00000564641 HSP90AB4PQ58FF6 505 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 SH2D4BQ5SQS7 431 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 C10orf62Q5T681 223 aaPredicted RBP4.35□□□□□ -1.71
CHD9-212ENST00000564641 FOXL2NBQ6ZUU3 175 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 SHFQ7M4L6 423 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 PRSS45Q7RTY3 260 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 SMIM29Q86T20 159 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 MAB21L3Q8N8X9 362 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 KCNH5Q8NCM2 988 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 LINS1Q8NG48 757 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 NEK9Q8TD19 979 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 CSGALNACT1Q8TDX6 532 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 PAGR1Q9BTK6 254 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 UBA5Q9GZZ9 404 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 ZNF224Q9NZL3 707 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 NDRG3Q9UGV2 375 aa4.35□□□□□ -1.71
CHD9-212ENST00000564641 SLCO3A1Q9UIG8 710 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms