RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 C4BPAP04003 597 aaKnown RBP5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 GIMD1P0DJR0 217 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 SFTPCP11686 197 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 PAMP19021 973 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 CD58P19256 250 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 CR2P20023 1033 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 C5AR1P21730 350 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 TGM2P21980 687 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 GJB2P29033 226 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 NASPP49321 788 aaPredicted RBP5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 AP3M2P53677 418 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 PLP2Q04941 152 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 ZNF542PQ5EBM4 170 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 PIK3R6Q5UE93 754 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 RNF219Q5W0B1 726 aaPredicted RBP5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 SPOPLQ6IQ16 392 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 RFWD3Q6PCD5 774 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 CRTC1Q6UUV9 634 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 EPM2AIP1Q7L775 607 aaPredicted RBP5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 MFN1Q8IWA4 741 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 CCDC117Q8IWD4 279 aaPredicted RBP5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 STK40Q8N2I9 435 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 CARNMT1Q8N4J0 409 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 PDILTQ8N807 584 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 ZNF557Q8N988 423 aaPredicted RBP5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 WDR36Q8NI36 951 aaKnown RBP5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 FIBINQ8TAL6 211 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 PLEKHO2Q8TD55 490 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 PARD3BQ8TEW8 1205 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 RNF139Q8WU17 664 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 NDRG1Q92597 394 aaKnown RBP5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 TTC17Q96AE7 1141 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 ARRDC3Q96B67 414 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 GRAMD1AQ96CP6 724 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 SGF29Q96ES7 293 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 PEX11GQ96HA9 241 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 PRR11Q96HE9 360 aaPredicted RBP5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 RPL10LQ96L21 214 aaKnown RBP5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 MRGPRX3Q96LB0 322 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 MYOCQ99972 504 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 BDH2Q9BUT1 245 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 CALN1Q9BXU9 219 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 DNAI2Q9GZS0 605 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 CAAP1Q9H8G2 361 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 KLHL11Q9NVR0 708 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 APEX2Q9UBZ4 518 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 SFMBT1Q9UHJ3 866 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 CYTH4Q9UIA0 394 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 SLCO3A1Q9UIG8 710 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 INTS6Q9UL03 887 aaKnown RBP5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 ERVW-1Q9UQF0 538 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 HBS1LQ9Y450 684 aaKnown RBP5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 PAXBP1Q9Y5B6 917 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 PCDHGA8Q9Y5G5 932 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 ENTPD2Q9Y5L3 495 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 SRPRBQ9Y5M8 271 aaKnown RBP5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 CLIC4Q9Y696 253 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 CKAP5Q14008 2032 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 NF1P21359 2839 aa5.31□□□□□ -1.56
TUBGCP4-209ENST00000564511 UBE4BO95155 1302 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 DOPEY2Q9Y3R5 2298 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 ANKRD34BA5PLL1 514 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 CDRT15L2A8MXV6 281 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 K7ESM1 405 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 SCAMP1O15126 338 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 SLC31A1O15431 190 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 MSI1O43347 362 aaKnown RBP5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 PPFIA2O75334 1257 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 PIAS2O75928 621 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 NEBLO76041 1014 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 ASS1P00966 412 aaKnown RBP5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 ASLP04424 464 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 RPN1P04843 607 aaKnown RBP5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 SRPRAP08240 638 aaKnown RBP5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 DRD3P35462 400 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 NUDT1P36639 197 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 SLC11A2P49281 568 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 TKTL1P51854 596 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 METAP1P53582 386 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 SLC8A3P57103 927 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 SNRPFP62306 86 aaKnown RBP5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 ECT2LQ008S8 904 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 CEBPZQ03701 1054 aaKnown RBP5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 INCA1Q0VD86 236 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 ZNF177Q13360 481 aaPredicted RBP5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 SERINC3Q13530 473 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 SLC9A5Q14940 896 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 TGIF1Q15583 401 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 IGFBP7Q16270 282 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 CDKN3Q16667 212 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 SETMARQ53H47 684 aaPredicted RBP5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 FSCBQ5H9T9 825 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 PITRM1Q5JRX3 1037 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 FAM26FQ5R3K3 315 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 MPP7Q5T2T1 576 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 VHLLQ6RSH7 139 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 RBM44Q6ZP01 1051 aaKnown RBP5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 MMS22LQ6ZRQ5 1243 aa5.3□□□□□ -1.56
TUBGCP4-209ENST00000564511 EFL1Q7Z2Z2 1120 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms