RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 TRIM7Q9C029 511 aa15.09■□□□□ 0.01
SPG7-210ENST00000564409 MYO1AQ9UBC5 1043 aa15.09■□□□□ 0.01
SPG7-210ENST00000564409 IP6K2Q9UHH9 426 aa15.09■□□□□ 0.01
SPG7-210ENST00000564409 PADI4Q9UM07 663 aa15.09■□□□□ 0.01
SPG7-210ENST00000564409 COQ6Q9Y2Z9 468 aa15.09■□□□□ 0.01
SPG7-210ENST00000564409 PCDHB1Q9Y5F3 818 aa15.09■□□□□ 0.01
SPG7-210ENST00000564409 CACNB4O00305 520 aaPredicted RBP15.08■□□□□ 0
SPG7-210ENST00000564409 PDE2AO00408 941 aaPredicted RBP15.08■□□□□ 0
SPG7-210ENST00000564409 TRAFD1O14545 582 aaPredicted RBP15.08■□□□□ 0
SPG7-210ENST00000564409 SERPING1P05155 500 aa15.08■□□□□ 0
SPG7-210ENST00000564409 SKILP12757 684 aa15.08■□□□□ 0
SPG7-210ENST00000564409 MYF5P13349 255 aa15.08■□□□□ 0
SPG7-210ENST00000564409 TGM2P21980 687 aa15.08■□□□□ 0
SPG7-210ENST00000564409 RGRP47804 291 aa15.08■□□□□ 0
SPG7-210ENST00000564409 SCNN1BP51168 640 aa15.08■□□□□ 0
SPG7-210ENST00000564409 SRP54P61011 504 aaKnown RBP15.08■□□□□ 0
SPG7-210ENST00000564409 GABREP78334 506 aa15.08■□□□□ 0
SPG7-210ENST00000564409 ZBED6P86452 979 aa15.08■□□□□ 0
SPG7-210ENST00000564409 C1orf61Q13536 156 aa15.08■□□□□ 0
SPG7-210ENST00000564409 ZNF235Q14590 738 aa15.08■□□□□ 0
SPG7-210ENST00000564409 ALG11Q2TAA5 492 aa15.08■□□□□ 0
SPG7-210ENST00000564409 HGSNATQ68CP4 663 aa15.08■□□□□ 0
SPG7-210ENST00000564409 ENPP7Q6UWV6 458 aa15.08■□□□□ 0
SPG7-210ENST00000564409 LIPIQ6XZB0 460 aa15.08■□□□□ 0
SPG7-210ENST00000564409 HID1Q8IV36 788 aa15.08■□□□□ 0
SPG7-210ENST00000564409 ARL10Q8N8L6 244 aa15.08■□□□□ 0
SPG7-210ENST00000564409 LSM14AQ8ND56 463 aaKnown RBP15.08■□□□□ 0
SPG7-210ENST00000564409 NSMCE1Q8WV22 266 aa15.08■□□□□ 0
SPG7-210ENST00000564409 HIC2Q96JB3 615 aa15.08■□□□□ 0
SPG7-210ENST00000564409 UBL7Q96S82 380 aaPredicted RBP15.08■□□□□ 0
SPG7-210ENST00000564409 CLPBQ9H078 707 aa15.08■□□□□ 0
SPG7-210ENST00000564409 TCEAL2Q9H3H9 227 aaPredicted RBP15.08■□□□□ 0
SPG7-210ENST00000564409 PRORYQ9H606 182 aa15.08■□□□□ 0
SPG7-210ENST00000564409 CAAP1Q9H8G2 361 aa15.08■□□□□ 0
SPG7-210ENST00000564409 THSD1Q9NS62 852 aa15.08■□□□□ 0
SPG7-210ENST00000564409 RCOR3Q9P2K3 495 aaPredicted RBP15.08■□□□□ 0
SPG7-210ENST00000564409 KLQ9UEF7 1012 aa15.08■□□□□ 0
SPG7-210ENST00000564409 PNMA8BQ9ULN7 279 aaPredicted RBP15.08■□□□□ 0
SPG7-210ENST00000564409 UNC13CQ8NB66 2214 aa15.08■□□□□ 0
SPG7-210ENST00000564409 COL27A1Q8IZC6 1860 aaPredicted RBP15.08■□□□□ 0
SPG7-210ENST00000564409 TMX2-CTNND1H3BSU7 103 aa15.07■□□□□ 0
SPG7-210ENST00000564409 TK2O00142 265 aa15.07■□□□□ 0
SPG7-210ENST00000564409 MUSKO15146 869 aa15.07■□□□□ 0
SPG7-210ENST00000564409 HTRA2O43464 458 aaPredicted RBP15.07■□□□□ 0
SPG7-210ENST00000564409 RECQL5O94762 991 aaPredicted RBP15.07■□□□□ 0
SPG7-210ENST00000564409 TNFP01375 233 aa15.07■□□□□ 0
SPG7-210ENST00000564409 HOXB3P14651 431 aaPredicted RBP15.07■□□□□ 0
SPG7-210ENST00000564409 ITPKBP27987 946 aa15.07■□□□□ 0
SPG7-210ENST00000564409 TRIM23P36406 574 aa15.07■□□□□ 0
SPG7-210ENST00000564409 PBX1P40424 430 aa15.07■□□□□ 0
SPG7-210ENST00000564409 UCNP55089 124 aa15.07■□□□□ 0
SPG7-210ENST00000564409 CDH6P55285 790 aa15.07■□□□□ 0
SPG7-210ENST00000564409 UBASH3AP57075 661 aa15.07■□□□□ 0
SPG7-210ENST00000564409 FANCCQ00597 558 aa15.07■□□□□ 0
SPG7-210ENST00000564409 RALGDSQ12967 914 aa15.07■□□□□ 0
SPG7-210ENST00000564409 TSR1Q2NL82 804 aaKnown RBP15.07■□□□□ 0
SPG7-210ENST00000564409 ZSWIM9Q86XI8 627 aa15.07■□□□□ 0
SPG7-210ENST00000564409 CSPG4P5Q96PW8 444 aa15.07■□□□□ 0
SPG7-210ENST00000564409 NUDCD1Q96RS6 583 aa15.07■□□□□ 0
SPG7-210ENST00000564409 RBM15Q96T37 977 aaKnown RBP eCLIP15.07■□□□□ 02e-11■■■■■ 37.9
SPG7-210ENST00000564409 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.07■□□□□ 0
SPG7-210ENST00000564409 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.07■□□□□ 0
SPG7-210ENST00000564409 LCMT1Q9UIC8 334 aa15.07■□□□□ 0
SPG7-210ENST00000564409 CAPN11Q9UMQ6 739 aa15.07■□□□□ 0
SPG7-210ENST00000564409 LUC7L2Q9Y383 392 aaKnown RBP15.07■□□□□ 0
SPG7-210ENST00000564409 PCDHGA8Q9Y5G5 932 aa15.07■□□□□ 0
SPG7-210ENST00000564409 ARHGEF17Q96PE2 2063 aaPredicted RBP15.07■□□□□ 0
SPG7-210ENST00000564409 IGSF10Q6WRI0 2623 aa15.06■□□□□ 0
SPG7-210ENST00000564409 EIF4E1BA6NMX2 242 aaKnown RBP15.06■□□□□ 0
SPG7-210ENST00000564409 MYO1FO00160 1098 aa15.06■□□□□ 0
SPG7-210ENST00000564409 MAFKO60675 156 aa15.06■□□□□ 0
SPG7-210ENST00000564409 MPOP05164 745 aa15.06■□□□□ 0
SPG7-210ENST00000564409 CYP1A2P05177 515 aa15.06■□□□□ 0
SPG7-210ENST00000564409 RARAP10276 462 aa15.06■□□□□ 0
SPG7-210ENST00000564409 KRT10P13645 584 aa15.06■□□□□ 0
SPG7-210ENST00000564409 CR2P20023 1033 aa15.06■□□□□ 0
SPG7-210ENST00000564409 IL1R2P27930 398 aa15.06■□□□□ 0
SPG7-210ENST00000564409 RBMS1P29558 406 aaKnown RBP15.06■□□□□ 0
SPG7-210ENST00000564409 SLC10A7Q0GE19 358 aa15.06■□□□□ 0
SPG7-210ENST00000564409 SPIDRQ14159 915 aa15.06■□□□□ 0
SPG7-210ENST00000564409 KIF26BQ2KJY2 2108 aa15.06■□□□□ 0
SPG7-210ENST00000564409 BROXQ5VW32 411 aa15.06■□□□□ 0
SPG7-210ENST00000564409 ARHGAP36Q6ZRI8 547 aa15.06■□□□□ 0
SPG7-210ENST00000564409 ATPAF2Q8N5M1 289 aa15.06■□□□□ 0
SPG7-210ENST00000564409 OR56A4Q8NGH8 313 aa15.06■□□□□ 0
SPG7-210ENST00000564409 HSPH1Q92598 858 aa15.06■□□□□ 0
SPG7-210ENST00000564409 TSACCQ96A04 125 aaPredicted RBP15.06■□□□□ 0
SPG7-210ENST00000564409 CCDC97Q96F63 343 aaPredicted RBP15.06■□□□□ 0
SPG7-210ENST00000564409 LGMNQ99538 433 aa15.06■□□□□ 0
SPG7-210ENST00000564409 MGME1Q9BQP7 344 aa15.06■□□□□ 0
SPG7-210ENST00000564409 DPH1Q9BZG8 443 aa15.06■□□□□ 0
SPG7-210ENST00000564409 CBX8Q9HC52 389 aa15.06■□□□□ 0
SPG7-210ENST00000564409 HAUS2Q9NVX0 235 aa15.06■□□□□ 0
SPG7-210ENST00000564409 PHTF1Q9UMS5 762 aa15.06■□□□□ 0
SPG7-210ENST00000564409 GPR34Q9UPC5 381 aa15.06■□□□□ 0
SPG7-210ENST00000564409 OR1A2Q9Y585 309 aa15.06■□□□□ 0
SPG7-210ENST00000564409 ENTPD2Q9Y5L3 495 aa15.06■□□□□ 0
SPG7-210ENST00000564409 FASNP49327 2511 aaKnown RBP15.06■□□□□ 0
SPG7-210ENST00000564409 TEX51A0A1B0GUA7 166 aa15.05■□□□□ -0
SPG7-210ENST00000564409 GOLGA6L19H0YKK7 550 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms