RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 WDR83Q9BRX9 315 aaKnown RBP12.88□□□□□ -0.35
CLK3-214ENST00000564096 KIFC1Q9BW19 673 aa12.88□□□□□ -0.35
CLK3-214ENST00000564096 SEMA4AQ9H3S1 761 aa12.88□□□□□ -0.35
CLK3-214ENST00000564096 MTG2Q9H4K7 406 aa12.88□□□□□ -0.35
CLK3-214ENST00000564096 PPCSQ9HAB8 311 aa12.88□□□□□ -0.35
CLK3-214ENST00000564096 MAGEE1Q9HCI5 957 aa12.88□□□□□ -0.35
CLK3-214ENST00000564096 LTB4R2Q9NPC1 389 aa12.88□□□□□ -0.35
CLK3-214ENST00000564096 HCN2Q9UL51 889 aa12.88□□□□□ -0.35
CLK3-214ENST00000564096 RIMKLBQ9ULI2 386 aa12.88□□□□□ -0.35
CLK3-214ENST00000564096 PPM1HQ9ULR3 514 aa12.88□□□□□ -0.35
CLK3-214ENST00000564096 ZNF711Q9Y462 761 aa12.88□□□□□ -0.35
CLK3-214ENST00000564096 RPS6KL1Q9Y6S9 549 aa12.88□□□□□ -0.35
CLK3-214ENST00000564096 MIA3Q5JRA6 1907 aa12.88□□□□□ -0.35
CLK3-214ENST00000564096 KANSL1LA0AUZ9 987 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 PAPSS2O95340 614 aaPredicted RBP12.87□□□□□ -0.35
CLK3-214ENST00000564096 SLC4A1P02730 911 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 NUDT17P0C025 328 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 WASP42768 502 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 EIF3BP55884 814 aaKnown RBP12.87□□□□□ -0.35
CLK3-214ENST00000564096 STARD6P59095 220 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 ELP6Q0PNE2 266 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 ARHGEF7Q14155 803 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 FRG1Q14331 258 aaKnown RBP12.87□□□□□ -0.35
CLK3-214ENST00000564096 KYNUQ16719 465 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 SKIDA1Q1XH10 827 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 ZNF449Q6P9G9 518 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 FBXL19Q6PCT2 694 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 UNC5AQ6ZN44 842 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 CROCCP2Q86T23 111 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 MMAAQ8IVH4 418 aaKnown RBP12.87□□□□□ -0.35
CLK3-214ENST00000564096 CNPY4Q8N129 248 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 MCCC1Q96RQ3 725 aaPredicted RBP12.87□□□□□ -0.35
CLK3-214ENST00000564096 LYSMD1Q96S90 227 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 GPR63Q9BZJ6 419 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 RSPH9Q9H1X1 276 aaPredicted RBP12.87□□□□□ -0.35
CLK3-214ENST00000564096 VIPAS39Q9H9C1 493 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 LRRC4CQ9HCJ2 640 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 ZDHHC4Q9NPG8 344 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 MMP17Q9ULZ9 603 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 SCML1Q9UN30 329 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 PKP3Q9Y446 797 aa12.87□□□□□ -0.35
CLK3-214ENST00000564096 C1orf232A0A0U1RR37 186 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 GOLGA6L10A6NI86 522 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 C16orf96A6NNT2 1141 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 DNTTP04053 509 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 CHRM1P11229 460 aaPredicted RBP12.86□□□□□ -0.35
CLK3-214ENST00000564096 ZNF30P17039 623 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 CTPS1P17812 591 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 C5AR1P21730 350 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 HADHAP40939 763 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 PRAMEP78395 509 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 ZBTB16Q05516 673 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 NAB1Q13506 487 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 CST6Q15828 149 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 UGP2Q16851 508 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 LONRF1Q17RB8 773 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 TSTD2Q5T7W7 516 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 IER5LQ5T953 404 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 ALS2CLQ60I27 953 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 PDPK2PQ6A1A2 396 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 KIAA0930Q6ICG6 404 aaPredicted RBP12.86□□□□□ -0.35
CLK3-214ENST00000564096 LRIG3Q6UXM1 1119 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 C3orf62Q6ZUJ4 267 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 ERN2Q76MJ5 926 aaKnown RBP12.86□□□□□ -0.35
CLK3-214ENST00000564096 PARS2Q7L3T8 475 aaKnown RBP12.86□□□□□ -0.35
CLK3-214ENST00000564096 TMEM135Q86UB9 458 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 AGGF1Q8N302 714 aaeCLIP12.86□□□□□ -0.35
CLK3-214ENST00000564096 STYXQ8WUJ0 223 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 RAB7BQ96AH8 199 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 PBXIP1Q96AQ6 731 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 SCRN2Q96FV2 425 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 NSMCE3Q96MG7 304 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 CYTH2Q99418 400 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 C19orf43Q9BQ61 176 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 FAM167BQ9BTA0 163 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 IER2Q9BTL4 223 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 HDAC8Q9BY41 377 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 ACSS3Q9H6R3 686 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 TBC1D17Q9HA65 648 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 POLMQ9NP87 494 aaPredicted RBP12.86□□□□□ -0.35
CLK3-214ENST00000564096 PPANQ9NQ55 473 aaKnown RBP12.86□□□□□ -0.35
CLK3-214ENST00000564096 POLR3BQ9NW08 1133 aaPredicted RBP12.86□□□□□ -0.35
CLK3-214ENST00000564096 MUTYHQ9UIF7 546 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 PPIL1Q9Y3C6 166 aa12.86□□□□□ -0.35
CLK3-214ENST00000564096 EXOC1LA0A1B0GW35 172 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 TCRBV9S1A1TA0A576 114 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 KRBA1A5PL33 1030 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 MROH6A6NGR9 719 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 SHISA7A6NL88 538 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 CHURC1-FNTBB4DL54 471 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 STX7O15400 261 aaKnown RBP12.85□□□□□ -0.35
CLK3-214ENST00000564096 ATP8B1O43520 1251 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 ADAM23O75077 832 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 PRKCGP05129 697 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 ALPIP09923 528 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 PIRTP0C851 137 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 CHRNB1P11230 501 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 ADRB3P13945 408 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 CD72P21854 359 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 LPOP22079 712 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms